RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 LYRM1O43325 122 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 RAB36O95755 333 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 APEX1P27695 318 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 CTNNB1P35222 781 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 XKP51811 444 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 WSCD2Q2TBF2 565 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 ATP13A5Q4VNC0 1218 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 C7orf61Q8IZ16 206 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 HUS1BQ8NHY5 278 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 MRPS31Q92665 395 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 UPRTQ96BW1 309 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 AP2M1Q96CW1 435 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 LYSMD1Q96S90 227 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 MCUBQ9NWR8 336 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 RWDD3Q9Y3V2 267 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 HEPACAM2A8MVW5 462 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 A8MX80 341 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 SOX14O95416 240 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 C8AP07357 584 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 UQCRC1P31930 480 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 SMAD3P84022 425 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 RIN1Q13671 783 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 PDZD3Q86UT5 571 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 LAPTM4BQ86VI4 370 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 RASGRP3Q8IV61 690 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 DCAF4L2Q8NA75 395 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 KREMEN2Q8NCW0 462 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 TMEM163Q8TC26 289 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 WRAP53Q9BUR4 548 aaKnown RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 GULP1Q9UBP9 304 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 ACSL6Q9UKU0 697 aa14.05□□□□□ -0.16
CAPN1-224ENST00000533129 SPIN1Q9Y657 262 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-224ENST00000533129 NPIPB15A6NHN6 443 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 WASHC1A8K0Z3 465 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 H3BN98 237 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TBL1XO60907 577 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 UBL4AP11441 157 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ARSBP15848 533 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ZNF8P17098 575 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PRKACBP22694 351 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 GABRR2P28476 465 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CHI3L1P36222 383 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 LIM2P55344 173 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ZNF763Q0D2J5 394 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ANGPT1Q15389 498 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 SLC5A12Q1EHB4 618 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CDONQ4KMG0 1287 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CEACAM20Q6UY09 585 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ZNF782Q6ZMW2 699 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 QSOX2Q6ZRP7 698 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 WDR53Q7Z5U6 358 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 GLCCI1Q86VQ1 547 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 AMIGO1Q86WK6 493 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TCEANCQ8N8B7 351 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PLA2G15Q8NCC3 412 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 GPR156Q8NFN8 814 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 OR52I1Q8NGK6 324 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 DNAJA4Q8WW22 397 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TMEM203Q969S6 136 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 NECTIN4Q96NY8 510 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 HDHD5Q9BXW7 423 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 NLKQ9UBE8 527 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PHF11Q9UIL8 331 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PRELID1Q9Y255 219 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 MAP4K5Q9Y4K4 846 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 SPEF1Q9Y4P9 236 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CLCA3PQ9Y6N3 262 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ANAPC1Q9H1A4 1944 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 FAAHO00519 579 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 GPR37L1O60883 481 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CSKP41240 450 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CSNK1DP48730 415 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 MRPL28Q13084 256 aaKnown RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 FLYWCH1Q4VC44 716 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 SLC25A30Q5SVS4 291 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TXNDC8Q6A555 127 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 CRTC1Q6UUV9 634 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 FAM26EQ8N5C1 309 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 OR52P1PQ8NH57 321 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ALG14Q96F25 216 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 PKP4Q99569 1192 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 KCNJ15Q99712 375 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 ISYNA1Q9NPH2 558 aa14.04□□□□□ -0.16
CAPN1-224ENST00000533129 TESQ9UGI8 421 aaKnown RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 HELZP42694 1942 aaKnown RBP14.04□□□□□ -0.16
CAPN1-224ENST00000533129 SLC30A4O14863 429 aa14.03□□□□□ -0.16
CAPN1-224ENST00000533129 KPNA5O15131 536 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms