RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 UBXN2BQ14CS0 331 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 TCTE1Q5JU00 501 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 COX20Q5RI15 118 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 OGFOD3Q6PK18 319 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 VN1R4Q7Z5H5 301 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 DEPDC4Q8N2C3 294 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 LRRC25Q8N386 305 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 PARP8Q8N3A8 854 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 ATG16L2Q8NAA4 619 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 FAM46DQ8NEK8 389 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 OR8K5Q8NH50 307 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 ZNF420Q8TAQ5 688 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 SLC37A2Q8TED4 501 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 ZNF578Q96N58 590 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 TRNT1Q96Q11 434 aaKnown RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 SORBS1Q9BX66 1292 aaKnown RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 ACTRT3Q9BYD9 372 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 KRT84Q9NSB2 600 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 TEX10Q9NXF1 929 aaPredicted RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 SCN3BQ9NY72 215 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 NDUFAF4Q9P032 175 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 TMCC3Q9ULS5 477 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 DAPP1Q9UN19 280 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 MRPS33Q9Y291 106 aaKnown RBP11.6□□□□□ -0.55
CHD7-211ENST00000532149 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 TPRKBQ9Y3C4 175 aa11.6□□□□□ -0.55
CHD7-211ENST00000532149 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 HYKKA2RU49 373 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 LMO7DNF2Z398 122 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 HMGN4O00479 90 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MFN2O95140 757 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 AIFM1O95831 613 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 EML2O95834 649 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 B3GALT4O96024 378 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MT-ND1P03886 318 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 NR2F1P10589 423 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MAGP20916 626 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 XCR1P46094 333 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 KCNJ5P48544 419 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 HSPB3Q12988 150 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 FZD5Q13467 585 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 FAM53BQ14153 422 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MICAQ29983 383 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 IQCCQ4KMZ1 466 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 COLEC12Q5KU26 742 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 TPRG1LQ5T0D9 272 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ZNF691Q5VV52 312 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 BROXQ5VW32 411 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 FCRL6Q6DN72 434 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 TBPL2Q6SJ96 375 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 Q6ZS52 159 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 C17orf82Q86X59 251 aaPredicted RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 PLD3Q8IV08 490 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 CCL4L1Q8NHW4 92 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 FBLIM1Q8WUP2 373 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 IPCEF1Q8WWN9 437 aaPredicted RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 DNASE2BQ8WZ79 361 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 NCSTNQ92542 709 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 TAMM41Q96BW9 452 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ELP4Q96EB1 424 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ZNF681Q96N22 645 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MUS81Q96NY9 551 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 MAPKAP1Q9BPZ7 522 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ORAI3Q9BRQ5 295 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 PELOQ9BRX2 385 aaKnown RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 PINK1Q9BXM7 581 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 GABARAPL3Q9BY60 117 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 POLE3Q9NRF9 147 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 PDP1Q9P0J1 537 aaPredicted RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 KCMF1Q9P0J7 381 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 TMEM9Q9P0T7 183 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 SEC14L3Q9UDX4 400 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 KCND3Q9UK17 655 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 RAB23Q9ULC3 237 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 HCN4Q9Y3Q4 1203 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 ATG4BQ9Y4P1 393 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 GPC6Q9Y625 555 aaPredicted RBP11.59□□□□□ -0.55
CHD7-211ENST00000532149 FANCMQ8IYD8 2048 aa11.59□□□□□ -0.55
CHD7-211ENST00000532149 BCKDKO14874 412 aa11.58□□□□□ -0.56
CHD7-211ENST00000532149 SLC28A2O43868 658 aa11.58□□□□□ -0.56
CHD7-211ENST00000532149 GCM2O75603 506 aaPredicted RBP11.58□□□□□ -0.56
CHD7-211ENST00000532149 ERAL1O75616 437 aaKnown RBP11.58□□□□□ -0.56
CHD7-211ENST00000532149 UBXN7O94888 489 aa11.58□□□□□ -0.56
CHD7-211ENST00000532149 ZNF888P0CJ79 500 aaPredicted RBP11.58□□□□□ -0.56
CHD7-211ENST00000532149 PORP16435 677 aaPredicted RBP11.58□□□□□ -0.56
CHD7-211ENST00000532149 JUNBP17275 347 aaPredicted RBP11.58□□□□□ -0.56
CHD7-211ENST00000532149 CD72P21854 359 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms