RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 AANATQ16613 207 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 RGS21Q2M5E4 152 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CRY2Q49AN0 593 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SPATA46Q5T0L3 261 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ATL3Q6DD88 541 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 DHRS7BQ6IAN0 325 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ETFRF1Q6IPR1 90 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CASC4Q6P4E1 433 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CLEC2AQ6UVW9 174 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 C3P1Q6ZMU1 363 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 MSANTD1Q6ZTZ1 278 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GLRX5Q86SX6 157 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SYCE1Q8N0S2 351 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GUF1Q8N442 669 aaKnown RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ZNF565Q8N9K5 539 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 TDRD5Q8NAT2 981 aaKnown RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 OR52B6Q8NGF0 335 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 OR10G7Q8NGN6 311 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ENKURQ8TC29 256 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SEPT1Q8WYJ6 367 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 PEX13Q92968 403 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 RAB7BQ96AH8 199 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 PGAP3Q96FM1 320 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CHMP6Q96FZ7 201 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 TPD52L3Q96J77 140 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CEP19Q96LK0 163 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 TCEANC2Q96MN5 208 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 DGAT2Q96PD7 388 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 PRAM1Q96QH2 718 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ABHD1Q96SE0 405 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ERP44Q9BS26 406 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 MTG1Q9BT17 334 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 TRIM62Q9BVG3 475 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 FAM129AQ9BZQ8 928 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SLC39A8Q9C0K1 460 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 DCTPP1Q9H773 170 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 DDX28Q9NUL7 540 aaKnown RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 NUDT15Q9NV35 164 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GDE1Q9NZC3 331 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 IL17BQ9UHF5 180 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ATP6V1HQ9UI12 483 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 PLAGL1Q9UM63 463 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CFL2Q9Y281 166 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ASB3Q9Y575 518 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 LOC100506127A0A0U1RQW1 187 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 C1orf232A0A0U1RR37 186 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 A0A1W2PRV1 198 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 HEATR9A2RTY3 570 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CCDC162PA2VCL2 907 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 C5orf51A6NDU8 294 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PRDM1O75626 825 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CIB2O75838 187 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 NEBLO76041 1014 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 KLHL2O95198 593 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 OTCP00480 354 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ASNSP08243 561 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ALOX5P09917 674 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 OR2T7P0C7T2 308 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PRPS2P11908 318 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 GJA1P17302 382 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PTPRGP23470 1445 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PTBP1P26599 531 aaKnown RBP eCLIP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CETN2P41208 172 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CAPZA2P47755 286 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 OR3A2P47893 321 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 HSPA13P48723 471 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 DHPSP49366 369 aaPredicted RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 GDI2P50395 445 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 DNA2P51530 1060 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ADARP55265 1226 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ATP5IP56385 69 aaPredicted RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 VBP1P61758 197 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 TSPAN5P62079 268 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 SIRPAP78324 504 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 OTUD4Q01804 1114 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PRKCEQ02156 737 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 NCBP1Q09161 790 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 HSPA14Q0VDF9 509 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 NPRL3Q12980 569 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 GPM6BQ13491 265 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 SNTB1Q13884 538 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CASP8Q14790 479 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PDK1Q15118 436 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 KRT31Q15323 416 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 Q1RN00 199 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 USH1GQ495M9 461 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ATAD3BQ5T9A4 648 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 TMEM53Q6P2H8 277 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 LINC00696Q6ZRV3 163 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 TRMT10CQ7L0Y3 403 aaKnown RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 LDB1Q86U70 411 aaPredicted RBP3.06□□□□□ -1.92
PTPRK-220ENST00000531466 CATSPER3Q86XQ3 398 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 UNC5CLQ8IV45 518 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 SLC22A9Q8IVM8 553 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 TCAIMQ8N3R3 496 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 ZNF321PQ8N8H1 164 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 Q8NFD4 153 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 TSPAN14Q8NG11 270 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 URGCPQ8TCY9 931 aa3.06□□□□□ -1.92
PTPRK-220ENST00000531466 PIGBQ92521 554 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms