RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 SLC37A1P57057 533 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 FBXW4P57775 412 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 TBL3Q12788 808 aaKnown RBP19.26■□□□□ 0.67
CHKA-206ENST00000531341 CHIT1Q13231 466 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 EBPQ15125 230 aaKnown RBP19.26■□□□□ 0.67
CHKA-206ENST00000531341 PDK4Q16654 411 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 AP5B1Q2VPB7 878 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 TAOK1Q7L7X3 1001 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 KIF18BQ86Y91 864 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 C9orf106Q8NAJ2 232 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 DIO2Q92813 273 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 WDYHV1Q96HA8 205 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 ZNF597Q96LX8 424 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 YIPF4Q9BSR8 244 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 DERL2Q9GZP9 239 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 DDX47Q9H0S4 455 aaKnown RBP19.26■□□□□ 0.67
CHKA-206ENST00000531341 MTO1Q9Y2Z2 717 aaKnown RBP19.26■□□□□ 0.67
CHKA-206ENST00000531341 JRKLQ9Y4A0 524 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 SPACA6W5XKT8 324 aa19.26■□□□□ 0.67
CHKA-206ENST00000531341 FREM3P0C091 2139 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 JMJD1CQ15652 2540 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 IQANK1A0A1B0GTG1 560 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 MBD3L4A6NDZ8 208 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 MBD3L3A6NE82 208 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 MBD3L5A6NJ08 208 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 CCNT2O60583 730 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 PCNAP12004 261 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 ALOX15P16050 662 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 GMPRP36959 345 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 CASP2P42575 452 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 SSR2P43308 183 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 SLCO1A2P46721 670 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 CDK9P50750 372 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 HNRNPH2P55795 449 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 SORDQ00796 357 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 IRF8Q02556 426 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 MGAT5Q09328 741 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 FOXF2Q12947 444 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 FASTKD3Q14CZ7 662 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 EIPR1Q53HC9 387 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 OR4C11Q6IEV9 310 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 PLXDC2Q6UX71 529 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 RNF111Q6ZNA4 994 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 SLC29A4Q7RTT9 530 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 GPSM1Q86YR5 675 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 TCAIMQ8N3R3 496 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 SRFBP1Q8NEF9 429 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 MBD3L2Q8NHZ7 208 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 ACTRT1Q8TDG2 376 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 HSPBAP1Q96EW2 488 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 KRT12Q99456 494 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 NAP1L3Q99457 506 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 UGT2B28Q9BY64 529 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 PHACTR1Q9C0D0 580 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 SMYD2Q9NRG4 433 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 BEX4Q9NWD9 120 aaPredicted RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 MOCS1Q9NZB8 636 aa19.25■□□□□ 0.67
CHKA-206ENST00000531341 PTBP2Q9UKA9 531 aaKnown RBP19.25■□□□□ 0.67
CHKA-206ENST00000531341 ANKRD33BA6NCL7 494 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 CD8B2A6NJW9 211 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 CD1DP15813 335 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 LAPTM5Q13571 262 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 E2F2Q14209 437 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 FRG1Q14331 258 aaKnown RBP19.24■□□□□ 0.67
CHKA-206ENST00000531341 HIST2H2ACQ16777 129 aaPredicted RBP19.24■□□□□ 0.67
CHKA-206ENST00000531341 TMEM35AQ53FP2 167 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 HIST2H2AA3Q6FI13 130 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 SULT1C3Q6IMI6 304 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 PM20D2Q8IYS1 436 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 DND1Q8IYX4 353 aaKnown RBP19.24■□□□□ 0.67
CHKA-206ENST00000531341 ST13P4Q8IZP2 240 aaPredicted RBP19.24■□□□□ 0.67
CHKA-206ENST00000531341 PDIK1LQ8N165 341 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 ZNF441Q8N8Z8 693 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 RILPQ96NA2 401 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 CNOT10Q9H9A5 744 aaKnown RBP19.24■□□□□ 0.67
CHKA-206ENST00000531341 POPDC3Q9HBV1 291 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 PPP2R2CQ9Y2T4 447 aa19.24■□□□□ 0.67
CHKA-206ENST00000531341 A0A1W2PS29 197 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 PHGDHO43175 533 aaKnown RBP19.23■□□□□ 0.67
CHKA-206ENST00000531341 DYRK3O43781 588 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 CCDC166P0CW27 439 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 PLIN5Q00G26 463 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 TBCCQ15814 346 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 SPRED3Q2MJR0 410 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 NHSL2Q5HYW2 709 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 PAGE2BQ5JRK9 111 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 WIPI1Q5MNZ9 446 aaPredicted RBP19.23■□□□□ 0.67
CHKA-206ENST00000531341 DEPDC1Q5TB30 811 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 KHDRBS2Q5VWX1 349 aaKnown RBP19.23■□□□□ 0.67
CHKA-206ENST00000531341 SHEQ5VZ18 495 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 SYDE1Q6ZW31 735 aaPredicted RBP19.23■□□□□ 0.67
CHKA-206ENST00000531341 GPR180Q86V85 440 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 LAS2Q8IYD9 372 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 OR7G3Q8NG95 312 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 NUDT8Q8WV74 236 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 TANKQ92844 425 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 ART5Q96L15 291 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 OSBPL9Q96SU4 736 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 ANGPTL4Q9BY76 406 aa19.23■□□□□ 0.67
CHKA-206ENST00000531341 PRM3Q9NNZ6 103 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms