RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ARCQ7LC44 396 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ZSCAN30Q86W11 494 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 TRIM69Q86WT6 500 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 GBGT1Q8N5D6 347 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ATP6V0D2Q8N8Y2 350 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 UBA3Q8TBC4 463 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 WFDC5Q8TCV5 224 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 DQX1Q8TE96 717 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 SAP25Q8TEE9 199 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PPP4R1Q8TF05 950 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 SETD7Q8WTS6 366 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 NDRG1Q92597 394 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 NT5C3BQ969T7 300 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ALG14Q96F25 216 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 LINGO1Q96FE5 620 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PGAP3Q96FM1 320 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 HES6Q96HZ4 224 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PRICKLE1Q96MT3 831 aaPredicted RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 SPAG5Q96R06 1193 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 PRMT1Q99873 361 aaKnown RBP4.36□□□□□ -1.71
CSDE1-212ENST00000529046 MMP28Q9H239 520 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 NEUROG2Q9H2A3 272 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 SEMA6AQ9H2E6 1030 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ZFP57Q9NU63 452 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 FBXL12Q9NXK8 326 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 DONSONQ9NYP3 566 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 TAS2R14Q9NYV8 317 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ANAPC2Q9UJX6 822 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 ERVW-1Q9UQF0 538 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 GON4LQ3T8J9 2241 aa4.36□□□□□ -1.71
CSDE1-212ENST00000529046 GOLGA6L7A0A1B0GV03 622 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 TRIM49BA6NDI0 452 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 GOLGA6L4A6NEF3 574 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 TRABD2BA6NFA1 517 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 M0QYV0 167 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 TLR4O00206 839 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 GPR137BO60478 399 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 HSF2BPO75031 334 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 CLDN11O75508 207 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 LDOC1O95751 146 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 TRUB2O95900 331 aaKnown RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 IGLV2-11P01706 119 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 APOEP02649 317 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 UMODP07911 640 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 CKMT2P17540 419 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 ACP1P24666 158 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 DRD3P35462 400 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 DCTP40126 519 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 CSKP41240 450 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 NR2C2P49116 596 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 SGSHP51688 502 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 C21orf59P57076 290 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 RPS24P62847 133 aaKnown RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 CCDC40Q4G0X9 1142 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 BRMS1LQ5PSV4 323 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 RABGAP1LQ5R372 815 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 GCNT6Q5T4J0 391 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 SYPL2Q5VXT5 272 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 TEX38Q6PEX7 206 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 PACS1Q6VY07 963 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 KRT77Q7Z794 578 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 SLC9B2Q86UD5 537 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 L3MBTL4Q8NA19 623 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 WDR20Q8TBZ3 569 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF606Q8WXB4 792 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 LPGAT1Q92604 370 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF582Q96NG8 517 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-212ENST00000529046 OR6C1Q96RD1 312 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 HHATLQ9HCP6 504 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 GDF3Q9NR23 364 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 HS3ST2Q9Y278 367 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 OR51B4Q9Y5P0 310 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 FAM169AQ9Y6X4 670 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 PKD1L2Q7Z442 2459 aa4.35□□□□□ -1.71
CSDE1-212ENST00000529046 PLXNB3Q9ULL4 1909 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 MYH10P35580 1976 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 IGLV3-10A0A075B6K4 115 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SYNDIG1LA6NDD5 238 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 PRR32B1ATL7 298 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 F5H5T6 163 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 PRAMEF26H0Y7S4 382 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 C16orf97H3BN30 126 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CAPN9O14815 690 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SSX4O60224 188 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 PRAMEF11O60813 436 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 BMP10O95393 424 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 PLGP00747 810 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 GP1BAP07359 652 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 VPREB1P12018 145 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CDH5P33151 784 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-212ENST00000529046 ACADVLP49748 655 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 RGS7P49802 495 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 TERF1P54274 439 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CDH4P55283 916 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 CD81P60033 236 aa4.34□□□□□ -1.71
CSDE1-212ENST00000529046 SNRPEP62304 92 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms