RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TRIM64A6NGJ6 449 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TRIM64BA6NI03 449 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 OR6C76A6NM76 312 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CAPN14A8MX76 684 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 A8MXE2 369 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CTIFO43310 598 aaKnown RBP11.23□□□□□ -0.61
SRPRA-202ENST00000527817 FGF17O60258 216 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 PRAMEF4O60810 478 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 SCELO95171 688 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 LRATO95237 230 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 ACTL6AO96019 429 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CPN1P15169 458 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CPN2P22792 545 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 MC3RP41968 323 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 NAGLUP54802 743 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 SLC37A1P57057 533 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 EEF1A1P68104 462 aaKnown RBP11.23□□□□□ -0.61
SRPRA-202ENST00000527817 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-202ENST00000527817 SPANXN3Q5MJ09 141 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 EEF1A1P5Q5VTE0 462 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 PRAMEF9Q5VWM5 478 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TTC27Q6P3X3 843 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 ADGRE4PQ86SQ3 457 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 LUZP2Q86TE4 346 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 OR4N5Q8IXE1 308 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TAGAPQ8N103 731 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TANKQ92844 425 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 WDR34Q96EX3 536 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 RILPQ96NA2 401 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TM9SF2Q99805 663 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 NAT9Q9BTE0 207 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 WWTR1Q9GZV5 400 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 PIGMQ9H3S5 423 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 RPF2Q9H7B2 306 aaKnown RBP11.23□□□□□ -0.61
SRPRA-202ENST00000527817 C15orf41Q9Y2V0 281 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 TESMINQ9Y4I5 508 aa11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CHD3Q12873 2000 aaKnown RBP11.23□□□□□ -0.61
SRPRA-202ENST00000527817 CLGNO14967 610 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CNOT4O95628 575 aaKnown RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CYP4B1P13584 511 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF37AP17032 561 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 HIST1H1TP22492 207 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 GGT5P36269 586 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CASP3P42574 277 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CPA2P48052 419 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 DIO3P55073 304 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 PLIN5Q00G26 463 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CBLBQ13191 982 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 GAB1Q13480 694 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 LAPTM5Q13571 262 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 DOC2AQ14183 400 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 SPRED3Q2MJR0 410 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 EIPR1Q53HC9 387 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 DCST1Q5T197 706 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 USF3Q68DE3 2245 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 PPIL6Q8IXY8 311 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 PPP1R14CQ8TAE6 165 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 SPPL2AQ8TCT8 520 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 SLC44A1Q8WWI5 657 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 WNT2BQ93097 391 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 MAGOHBQ96A72 148 aaKnown RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 PTCD3Q96EY7 689 aaKnown RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CERS2Q96G23 380 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 MS4A12Q9NXJ0 267 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 CTNNAL1Q9UBT7 734 aa11.22□□□□□ -0.61
SRPRA-202ENST00000527817 ANK3Q12955 4377 aaKnown RBP11.22□□□□□ -0.61
SRPRA-202ENST00000527817 NPEPPSL1A6NEC2 478 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 DEFB108AA8MXU0 73 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 TAPBPO15533 448 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 SIAH2O43255 324 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 GALNSP34059 522 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 SOX18P35713 384 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 CASP2P42575 452 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 MASP1P48740 699 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 HERVK_113P63132 956 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ERVK-8P63133 956 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 RPP38P78345 283 aaKnown RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 PCDH1Q08174 1060 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ZNF267Q14586 743 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 EBPQ15125 230 aaKnown RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 RPS6KA2Q15349 733 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 HIST2H2ACQ16777 129 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 TMEM35AQ53FP2 167 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-202ENST00000527817 BICRALQ6AI39 1079 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 TIGD3Q6B0B8 471 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 HIST2H2AA3Q6FI13 130 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 ADNP2Q6IQ32 1131 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 RNF111Q6ZNA4 994 aa11.21□□□□□ -0.61
SRPRA-202ENST00000527817 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms