RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PNO1Q9NRX1 252 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 MAT2BQ9NZL9 334 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 UTS2RQ9UKP6 389 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 POLHQ9Y253 713 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 EIF3LQ9Y262 564 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 MRPS33Q9Y291 106 aaKnown RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 LOC400499M0QZD8 3231 aa10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ANKRD11Q6UB99 2663 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-205ENST00000527046 ZZEF1O43149 2961 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 C9JVG2 144 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 E9PBE3 544 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 MAN1A2O60476 641 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 KLHL41O60662 606 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 NME6O75414 186 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ERAL1O75616 437 aaKnown RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 C1QCP02747 245 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ATP1B1P05026 303 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ITGAMP11215 1152 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PORP16435 677 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 CSNK2A2P19784 350 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PIK3R1P27986 724 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 MAPK1P28482 360 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ASMTP46597 345 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 GNGT1P63211 74 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 FUT7Q11130 342 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 STX4Q12846 297 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 MAD2L1Q13257 205 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 BIKQ13323 160 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 SERTAD2Q14140 314 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ELAVL1Q15717 326 aaKnown RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PDCD4Q53EL6 469 aaKnown RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 TRMT12Q53H54 448 aaKnown RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF628Q5EBL2 1059 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PLAG1Q6DJT9 500 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PAOXQ6QHF9 649 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ARMC10Q8N2F6 343 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF615Q8N8J6 731 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ADCY4Q8NFM4 1077 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 OR9I1Q8NGQ6 314 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 METTL21AQ8WXB1 218 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 KLHL29Q96CT2 875 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 SENP5Q96HI0 755 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 AMDHD1Q96NU7 426 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 TUBB6Q9BUF5 446 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ING2Q9H160 280 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 CLMPQ9H6B4 373 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 MMP25Q9NPA2 562 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 ADAM21Q9UKJ8 722 aa10.04□□□□□ -0.8
NEDD8-205ENST00000527046 G3BP2Q9UN86 482 aaKnown RBP10.04□□□□□ -0.8
NEDD8-205ENST00000527046 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 NSG1A0A0A6YYJ2 146 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 A0A0G2JND7 137 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 C17orf105B2RV13 164 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 UBDO15205 165 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF354AO60765 605 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 CBX7O95931 251 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 PDGFAP04085 211 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 EFNA1P20827 205 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 DGKQP52824 942 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 NME5P56597 212 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 ACTN3Q08043 901 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 TERF2Q15554 542 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 NXNQ6DKJ4 435 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 OR4F3Q6IEY1 312 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 EXD3Q8N9H8 876 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 B3GNT7Q8NFL0 401 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 CDC26Q8NHZ8 85 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 PSMA8Q8TAA3 256 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 M1APQ8TC57 530 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF675Q8TD23 568 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 EXTL1Q92935 676 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 TESCQ96BS2 214 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 LPAR4Q99677 370 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF552Q9H707 407 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 WDR41Q9HAD4 459 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 ZBTB20Q9HC78 741 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 SIRT3Q9NTG7 399 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 MAN2B2Q9Y2E5 1009 aa10.03□□□□□ -0.8
NEDD8-205ENST00000527046 COPG1Q9Y678 874 aaKnown RBP10.03□□□□□ -0.8
NEDD8-205ENST00000527046 CACNA1GO43497 2377 aa10.02□□□□□ -0.8
NEDD8-205ENST00000527046 ASPDHA6ND91 283 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 PEX12O00623 359 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 SNX3O60493 162 aa10.02□□□□□ -0.81
NEDD8-205ENST00000527046 PSMG1O95456 288 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms