RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CDH15P55291 814 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 VSX2P58304 361 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-203ENST00000524927 YWHAEP62258 255 aaKnown RBP6.34□□□□□ -1.39
NEDD8-203ENST00000524927 AP1B1Q10567 949 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 PRKAA1Q13131 559 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 AP5B1Q2VPB7 878 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 ARL13AQ5H913 290 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-203ENST00000524927 GARNL3Q5VVW2 1013 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 SHC4Q6S5L8 630 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 C1orf122Q6ZSJ8 110 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 IL17RELQ6ZVW7 336 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 GALNT7Q86SF2 657 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 TMEM110Q86TL2 294 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 NECAB1Q8N987 351 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 SEMA6DQ8NFY4 1073 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 C16orf52Q8NHV5 167 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 RFWD2Q8NHY2 731 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 C2CD4CQ8TF44 421 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 FAM216AQ8WUB2 273 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF347Q96SE7 839 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 TIMM29Q9BSF4 260 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 PIGVQ9NUD9 493 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 MED29Q9NX70 200 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF629Q9UEG4 869 aaPredicted RBP6.34□□□□□ -1.39
NEDD8-203ENST00000524927 SLC23A2Q9UGH3 650 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 CD84Q9UIB8 345 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 KCNS2Q9ULS6 477 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 PCDHGB1Q9Y5G3 927 aa6.34□□□□□ -1.39
NEDD8-203ENST00000524927 MED12Q93074 2177 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 A0A1B0GX78 115 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 KLRC4-KLRK1H3BQV0 150 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 RRHO14718 337 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CHUKO15111 745 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 KMOO15229 486 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 HS6ST1O60243 411 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 PALMO75781 387 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 NEURL1O76050 574 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 SERPINC1P01008 464 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 NHLRC4P0CG21 123 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF7P17097 686 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CXCR2P25025 360 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CYLC1P35663 651 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 COL10A1Q03692 680 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 IL13RA2Q14627 380 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 C1orf185Q5T7R7 199 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 H3F3CQ6NXT2 135 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 COX15Q7KZN9 410 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 MDGA2Q7Z553 956 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 TBC1D1Q86TI0 1168 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 NLRP14Q86W24 1093 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 NELFCDQ8IXH7 590 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 OR5M9Q8NGP3 310 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 FAM110DQ8TAY7 271 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 ZCCHC10Q8TBK6 192 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 RBMXL1Q96E39 390 aaKnown RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 FCRL5Q96RD9 977 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 NPLQ9BXD5 320 aaPredicted RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CADM1Q9BY67 442 aaKnown RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 ANGPTL4Q9BY76 406 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CHRNA10Q9GZZ6 450 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 PDCL3Q9H2J4 239 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 EML4Q9HC35 981 aaKnown RBP6.33□□□□□ -1.4
NEDD8-203ENST00000524927 DMAC2Q9NW81 257 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 TMEM248Q9NWD8 314 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CTSFQ9UBX1 484 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 CAMK2AQ9UQM7 478 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 DTX4Q9Y2E6 619 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF407Q9C0G0 2248 aa6.33□□□□□ -1.4
NEDD8-203ENST00000524927 A0A096LNT2 108 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 NPIPB15A6NHN6 443 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FAM90A7PA6NKC0 464 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 A8MUI8 341 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FAM90A22PA8MWA6 464 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FAM90A12PA8MX19 464 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 DEFB108AA8MXU0 73 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FAM90A23PA8MXZ1 464 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 E5RJQ4 531 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 SLC25A12O75746 678 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 CCDC166P0CW27 439 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF8P17098 575 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 PRDX3P30048 256 aaKnown RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 GABRA4P48169 554 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 EFNA3P52797 238 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ARSFP54793 590 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ENPEPQ07075 957 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 KLC1Q07866 573 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 LOXL1Q08397 574 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 GALNT3Q14435 633 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 MEP1AQ16819 746 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FCRLBQ6BAA4 426 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 ZNF474Q6S9Z5 364 aaPredicted RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 RFLNAQ6ZTI6 216 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 NLRP9Q7RTR0 991 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 R3HCC1LQ7Z5L2 792 aaKnown RBP6.32□□□□□ -1.4
NEDD8-203ENST00000524927 FAM47BQ8NA70 645 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 TNIP2Q8NFZ5 429 aa6.32□□□□□ -1.4
NEDD8-203ENST00000524927 SLC20A1Q8WUM9 679 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms