RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 UBXN6Q9BZV1 441 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 TNMDQ9H2S6 317 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 DPEP3Q9H4B8 488 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 KCNMB3Q9NPA1 279 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 DEPPQ9NTK1 212 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 THYN1Q9P016 225 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 EIF3KQ9UBQ5 218 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 KCNN3Q9UGI6 736 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 FETUBQ9UGM5 382 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 FAM153AQ9UHL3 310 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 RAPGEF6Q8TEU7 1601 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 FGD6Q6ZV73 1430 aa3.25□□□□□ -1.89
SKP1-212ENST00000523966 DHX29Q7Z478 1369 aaKnown RBP3.25□□□□□ -1.89
SKP1-212ENST00000523966 CHD1O14646 1710 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 SUPT6HQ7KZ85 1726 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 UHRF1BP1LA0JNW5 1464 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 ATP10BO94823 1461 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 MYH14Q7Z406 1995 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 SHROOM2Q13796 1616 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 RNF103-CHMP3A0A140T963 221 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 BCLAF3A2AJT9 711 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 ARHGEF33A8MVX0 844 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 CFLARO15519 480 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 HTATSF1O43719 755 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 DUSP11O75319 330 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 REC8O95072 547 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 GAS8-AS1O95177 125 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 FHP07954 510 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 PPP2R1BP30154 601 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 PITPNBP48739 271 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 RPS27AP62979 156 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 BTG3Q14201 252 aaPredicted RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 SLC17A1Q14916 467 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 EMC2Q15006 297 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 CMPK2Q5EBM0 449 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 AGAP7PQ5VUJ5 663 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 PRAMEF7Q5VXH5 474 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 NEPROQ6NW34 567 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 CDC42EP5Q6NZY7 148 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 DLEU7Q6UYE1 221 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 TAF8Q7Z7C8 310 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 LINC00518Q8N0U6 118 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 PARP8Q8N3A8 854 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 TMEM185AQ8NFB2 350 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 BEST4Q8NFU0 473 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 RDH11Q8TC12 318 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 MIPOL1Q8TD10 442 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 RAB39BQ96DA2 213 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 CDHR1Q96JP9 859 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 GPR137Q96N19 417 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 SPATA13Q96N96 652 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 RCHY1Q96PM5 261 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 PKP2Q99959 881 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 RBM4BQ9BQ04 359 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 RBM24Q9BX46 236 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 LRRCC1Q9C099 1032 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 JPT2Q9H910 190 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 SYTL2Q9HCH5 934 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.24□□□□□ -1.891e-6■□□□□ 9.4
SKP1-212ENST00000523966 TECRQ9NZ01 308 aaKnown RBP3.24□□□□□ -1.89
SKP1-212ENST00000523966 RARRES3Q9UL19 164 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 ODF2LQ9ULJ1 636 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 ENTPD4Q9Y227 616 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 SLC9A8Q9Y2E8 581 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 TEX264Q9Y6I9 313 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 WDR81Q562E7 1941 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 ABCA8O94911 1581 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 CLASP1Q7Z460 1538 aa3.24□□□□□ -1.89
SKP1-212ENST00000523966 KIF7Q2M1P5 1343 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 LOC390937A0A1W2PQ73 354 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SSX5O60225 188 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SNAP91O60641 907 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SYNGR4O95473 234 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SLC4A1P02730 911 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 TSPY4P0CV99 314 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 TSPY10P0CW01 314 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 AHCYP23526 432 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 FCARP24071 287 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SPRP35270 261 aaPredicted RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 SLC7A2P52569 658 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 LIMK2P53671 638 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 RPL27P61353 136 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 NME3Q13232 169 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 RIGQ13278 110 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 LY6DQ14210 128 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 EXOSC7Q15024 291 aaKnown RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 SHROOM1Q2M3G4 852 aaPredicted RBP3.23□□□□□ -1.89
SKP1-212ENST00000523966 FAM182AQ5T1J6 154 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 DCAF12Q5T6F0 453 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 SAMD12Q8N8I0 201 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 ZNF485Q8NCK3 441 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 PRSS33Q8NF86 280 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 OR8H1Q8NGG4 311 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 OR1B1Q8NGR6 318 aa3.23□□□□□ -1.89
SKP1-212ENST00000523966 KIAA1524Q8TCG1 905 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms