RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FBXW4P57775 412 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 LOXL1Q08397 574 aaPredicted RBP12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 FUT7Q11130 342 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 FAM174BQ3ZCQ3 159 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 ADAM5Q6NVV9 412 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 SBSNQ6UWP8 590 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 TMEM64Q6YI46 380 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 LILRB1Q8NHL6 650 aaPredicted RBP12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 SPPL2AQ8TCT8 520 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 TMEM41AQ96HV5 264 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 KRT12Q99456 494 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 AIF1LQ9BQI0 150 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 KIFC1Q9BW19 673 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 PELI2Q9HAT8 420 aa12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 TEX10Q9NXF1 929 aaPredicted RBP12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 MAGED1Q9Y5V3 778 aaPredicted RBP12.54□□□□□ -0.4
NKX3-1-202ENST00000523261 LRIT2A6NDA9 550 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 SERINC4A6NH21 518 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 GNB5O14775 395 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 OR10H2O60403 315 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 GCKP35557 465 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 GMPRP36959 345 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 CASP3P42574 277 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 RWDD2BP57060 319 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 SP140Q13342 867 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 KLF1Q13351 362 aaPredicted RBP12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 RCN2Q14257 317 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 UGT3A1Q6NUS8 523 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 NEPROQ6NW34 567 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 EEF1AKMT1Q8WVE0 214 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 REPS1Q96D71 796 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 ZMYND19Q96E35 227 aaPredicted RBP12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 C1orf159Q96HA4 380 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 FBXL20Q96IG2 436 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 SERINC2Q96SA4 455 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 KLHL4Q9C0H6 718 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 BARX1Q9HBU1 254 aaPredicted RBP12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 HEY2Q9UBP5 337 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 RNF112Q9ULX5 631 aa12.53□□□□□ -0.4
NKX3-1-202ENST00000523261 A0A088AWK7 358 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 FAM234BA2RU67 622 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 CD8BP10966 210 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 COX7A2P14406 83 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 PPP3CBP16298 524 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF10P21506 573 aaPredicted RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 NPY2RP49146 381 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 STARP49675 285 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 LHX2P50458 406 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 PLA2G16P53816 162 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 SIRPAP78324 504 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 EBPQ15125 230 aaKnown RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 FAM120AOSQ5T036 256 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 NXPE4Q6UWF7 544 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 DGAT2L6Q6ZPD8 337 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 SLC29A4Q7RTT9 530 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 PRUNE1Q86TP1 453 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF610Q8N9Z0 462 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 OR2L5Q8NG80 312 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 SMAP2Q8WU79 429 aaPredicted RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 FBXW5Q969U6 566 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 HS6ST2Q96MM7 605 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 CCDC68Q9H2F9 335 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 FBXO6Q9NRD1 293 aaPredicted RBP12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 SYBUQ9NX95 663 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 WWOXQ9NZC7 414 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 BFARQ9NZS9 450 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 TFR2Q9UP52 801 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
NKX3-1-202ENST00000523261 EXPH5Q8NEV8 1989 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 TCRBV7S2A1N4TA0A589 114 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 SSX4O60224 188 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 TBX6O95947 436 aaPredicted RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 IFNB1P01574 187 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 HIST1H2AGP0C0S8 130 aaPredicted RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 IGHV4-31P0DP07 118 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 ETS1P14921 441 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 HIST1H2ADP20671 130 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 MGAT1P26572 445 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 STT3AP46977 705 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 GFRA1P56159 465 aa12.51□□□□□ -0.41
NKX3-1-202ENST00000523261 CLDN18P56856 261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms