RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 NR5A2O00482 541 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 PCDH17O14917 1159 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 OR10H2O60403 315 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 WT1P19544 449 aaPredicted RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 EIF2S3P41091 472 aaKnown RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 NCBP2P52298 156 aaKnown RBP eCLIP22.6■■□□□ 1.215e-7■■□□□ 13.7
PVT1-212ENST00000521951 PLIN5Q00G26 463 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 SFT2D3Q587I9 215 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 DGAT2L6Q6ZPD8 337 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 CPEB2Q7Z5Q1 589 aaKnown RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 VPS33AQ96AX1 596 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 SPDL1Q96EA4 605 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 ZBED6CLQ96FA7 236 aaPredicted RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 AMDHD1Q96NU7 426 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 LRRC37BQ96QE4 947 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 OR52E6Q96RD3 313 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 PELOQ9BRX2 385 aaKnown RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 ADAP2Q9NPF8 381 aa22.6■■□□□ 1.21
PVT1-212ENST00000521951 ACSS1Q9NUB1 689 aaPredicted RBP22.6■■□□□ 1.21
PVT1-212ENST00000521951 IGHV3-20A0A0C4DH32 117 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 A0A1W2PRB8 838 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 SOCS6O14544 535 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 ATP1B1P05026 303 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 PTGER1P34995 402 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 MANFP55145 182 aaKnown RBP22.59■■□□□ 1.21
PVT1-212ENST00000521951 TIGD2Q4W5G0 525 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 ANXA8L1Q5VT79 327 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 KIRREL2Q6UWL6 708 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 UNQ6494/PRO21346Q6UXR6 183 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 ZNF551Q7Z340 670 aaPredicted RBP22.59■■□□□ 1.21
PVT1-212ENST00000521951 TREML1Q86YW5 311 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 ADAMTS17Q8TE56 1095 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 NACC2Q96BF6 587 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 FAM120CQ9NX05 1096 aaKnown RBP22.59■■□□□ 1.21
PVT1-212ENST00000521951 ASPMQ8IZT6 3477 aa22.59■■□□□ 1.21
PVT1-212ENST00000521951 URB1O60287 2271 aaKnown RBP22.58■■□□□ 1.21
PVT1-212ENST00000521951 PRSS51A0A1B0GVH4 220 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 TNNI3P19429 210 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 CAPN3P20807 821 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 GALNSP34059 522 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 EEF1A2Q05639 463 aaKnown RBP22.58■■□□□ 1.21
PVT1-212ENST00000521951 ELAVL1Q15717 326 aaKnown RBP22.58■■□□□ 1.21
PVT1-212ENST00000521951 VPS26BQ4G0F5 336 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 RAB43Q86YS6 212 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 DOK4Q8TEW6 326 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 PTPMT1Q8WUK0 201 aaPredicted RBP22.58■■□□□ 1.21
PVT1-212ENST00000521951 CCNL2Q96S94 520 aaPredicted RBP22.58■■□□□ 1.21
PVT1-212ENST00000521951 SSUH2Q9Y2M2 353 aa22.58■■□□□ 1.21
PVT1-212ENST00000521951 CCDC154A6NI56 674 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 RNASET2O00584 256 aaKnown RBP22.57■■□□□ 1.2
PVT1-212ENST00000521951 CFLARO15519 480 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 SNRPB2P08579 225 aaKnown RBP22.57■■□□□ 1.2
PVT1-212ENST00000521951 NT5EP21589 574 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 MLC1Q15049 377 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 LTB4RQ15722 352 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 ANKRD46Q86W74 232 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 CLECL1Q8IZS7 167 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 VPS37AQ8NEZ2 397 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 ADCY4Q8NFM4 1077 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 OR11G2Q8NGC1 345 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 OR9A2Q8NGT5 310 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 ZFP28Q8NHY6 868 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 TSPEARQ8WU66 669 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 OR5P2Q8WZ92 322 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 RIT1Q92963 219 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 WDR77Q9BQA1 342 aaPredicted RBP22.57■■□□□ 1.2
PVT1-212ENST00000521951 CXorf21Q9HAI6 301 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 FRYQ5TBA9 3013 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 DYTNA2CJ06 578 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 C17orf105B2RV13 164 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 EFSO43281 561 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 C6orf47O95873 294 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 MGAT2Q10469 447 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 PCOLCEQ15113 449 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 MSANTD1Q6ZTZ1 278 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 FITM2Q8N6M3 262 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 ERP27Q96DN0 273 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 ZNF700Q9H0M5 742 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 BTNL2Q9UIR0 455 aa22.57■■□□□ 1.2
PVT1-212ENST00000521951 PCSK5Q92824 1860 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 IGHV1-45A0A0A0MS14 117 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 LOC100653049A0A140TA62 436 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 A0A1W2PP18 115 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 A0A1W2PQ72 361 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 ASPDHA6ND91 283 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 CAPN14A8MX76 684 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 NKX2-8O15522 239 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 KRT34O76011 436 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 CT62P0C5K7 136 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 COX6A1P12074 109 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 SOX18P35713 384 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 HSPB3Q12988 150 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 TLR1Q15399 786 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 PRICKLE4Q2TBC4 344 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 PAPD4Q6PIY7 484 aaKnown RBP22.56■■□□□ 1.2
PVT1-212ENST00000521951 FAM111BQ6SJ93 734 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 MRGPREQ86SM8 312 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 SPACA3Q8IXA5 215 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 DCBLD2Q96PD2 775 aa22.56■■□□□ 1.2
PVT1-212ENST00000521951 LPAR4Q99677 370 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms