RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ARF1P84077 181 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PDE1BQ01064 536 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RELQ04864 619 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CNTN1Q12860 1018 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RNPS1Q15287 305 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TBCEQ15813 527 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 UGP2Q16851 508 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 POM121L1PQ3SYA9 428 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TMEM52BQ4KMG9 183 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SGO1Q5FBB7 561 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PAPPA-AS1Q5QFB9 102 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 FAM182AQ5T1J6 154 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CFAP58Q5T655 872 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PIP5KL1Q5T9C9 394 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KCTD11Q693B1 232 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CDC73Q6P1J9 531 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 NEK5Q6P3R8 708 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF449Q6P9G9 518 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC137Q6PK04 289 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 C19orf48Q6RUI8 117 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PRUNE1Q86TP1 453 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 NOXA1Q86UR1 476 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KBTBD6Q86V97 674 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TDRPQ86YL5 185 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CHERPQ8IWX8 916 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KLHL7Q8IXQ5 586 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 NDUFAF2Q8N183 169 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ZBTB2Q8N680 514 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CCDC89Q8N998 374 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ZBTB44Q8NCP5 570 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 MNS1Q8NEH6 495 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 OR2T34Q8NGX1 318 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SPATA22Q8NHS9 363 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 GRK7Q8WTQ7 553 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RLN3Q8WXF3 142 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SLCO2A1Q92959 643 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC45Q96CN5 670 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SCRN2Q96FV2 425 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 WBP1Q96G27 269 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 OXNAD1Q96HP4 312 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 NR1H4Q96RI1 486 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TRIB3Q96RU7 358 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 KRT12Q99456 494 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC1Q9BTT6 524 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 MLPHQ9BV36 600 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 DDX47Q9H0S4 455 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ESRP2Q9H6T0 727 aaKnown RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 SGK2Q9HBY8 427 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ZFP57Q9NU63 452 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 FAM118AQ9NWS6 357 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 WSB2Q9NYS7 404 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PAK5Q9P286 719 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 HSPB7Q9UBY9 170 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PCYOX1Q9UHG3 505 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 RSPH14Q9UHP6 348 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 CHKBQ9Y259 395 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PPIL1Q9Y3C6 166 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 ADAM18Q9Y3Q7 739 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 TTLL3Q9Y4R7 772 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 FADS3Q9Y5Q0 445 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 PSAT1Q9Y617 370 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 DOCK8Q8NF50 2099 aa3.04□□□□□ -1.92
VPS13B-209ENST00000521559 DOCK6Q96HP0 2047 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BRWD1Q9NSI6 2320 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 A0A0J9YYE9 177 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CTAGE15A4D2H0 777 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RGSL1A5PLK6 1076 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 IGLON5A6NGN9 336 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC72A6NJI9 287 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 A8MX80 341 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 ANKRD66B4E2M5 251 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 AP3B1O00203 1094 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PSMD11O00231 422 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SLC22A3O75751 556 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TM7SF2O76062 418 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 AP2A1O95782 977 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 GAS8O95995 478 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TRBC1P01850 177 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 FGF1P05230 155 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CLEC3BP05452 202 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PRSS1P07477 247 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 APRTP07741 180 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CTAGE8P0CG41 777 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RNF224P0DH78 156 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 G6PDP11413 515 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 GM2AP17900 193 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HLA-DPA1P20036 260 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BCKDHBP21953 392 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 NFKBIAP25963 317 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 IVDP26440 423 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CDAP32320 146 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 ACSL1P33121 698 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BSGP35613 385 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 NUDT1P36639 197 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 MAGEA6P43360 314 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TNNT3P45378 269 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 GLIPR1P48060 266 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms