RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ZNF451Q9Y4E5 1061 aa7.43□□□□□ -1.22
CTHRC1-203ENST00000520337 PCDHGA5Q9Y5G8 931 aa7.43□□□□□ -1.22
CTHRC1-203ENST00000520337 COL5A1P20908 1838 aaPredicted RBP7.43□□□□□ -1.22
CTHRC1-203ENST00000520337 OTOGLQ3ZCN5 2332 aa7.43□□□□□ -1.22
CTHRC1-203ENST00000520337 NINQ8N4C6 2090 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 WDFY4Q6ZS81 3184 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TRBV5-3A0A0A0MS03 114 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 IGHV5-51A0A0C4DH38 117 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TLCD2A6NGC4 264 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 NUDT19A8MXV4 375 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ERI3O43414 337 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SCELO95171 688 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 NPPAP01160 153 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZNF888P0CJ79 500 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ENGP17813 658 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 HOXA5P20719 270 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CDH3P22223 829 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 HIST1H1TP22492 207 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SLC6A2P23975 617 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ATP5A1P25705 553 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 S100A3P33764 101 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 GSTM5P46439 218 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PTDSS1P48651 473 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 HNRNPFP52597 415 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MAPK12P53778 367 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MTTPP55157 894 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SH3BGRP55822 239 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 RAB8AP61006 207 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 STXBP1P61764 594 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TRA2BP62995 288 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MVKQ03426 396 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 RGS1Q08116 209 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 NFYCQ13952 458 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CEACAM7Q14002 265 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CAPRIN1Q14444 709 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 KPNB1Q14974 876 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MPEG1Q2M385 716 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MUM1Q2TAK8 710 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PRTGQ2VWP7 1150 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TRMT5Q32P41 509 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MANEAQ5SRI9 462 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 LRIF1Q5T3J3 769 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CPTPQ5TA50 214 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 C6orf163Q5TEZ5 329 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 OR4F3Q6IEY1 312 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TCEAL6Q6IPX3 200 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 GUSBP11Q6P575 273 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZC3H14Q6PJT7 736 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 WDR74Q6RFH5 385 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 DBX2Q6ZNG2 339 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MSANTD1Q6ZTZ1 278 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 USP53Q70EK8 1073 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 IKBIPQ70UQ0 350 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PAGE2Q7Z2X7 111 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SPRED1Q7Z699 444 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 NUDT13Q86X67 352 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MSRB3Q8IXL7 192 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SLC15A3Q8IY34 581 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 FBXW8Q8N3Y1 598 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZCCHC7Q8N3Z6 543 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 Q8N9G6 341 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ACOT4Q8N9L9 421 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 OR8K5Q8NH50 307 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 WDR60Q8WVS4 1066 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 STMN2Q93045 179 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 UCN3Q969E3 161 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TCEAL3Q969E4 200 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TMEM125Q96AQ2 219 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MCUR1Q96AQ8 359 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZNF285Q96NJ3 590 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TGM7Q96PF1 710 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 KCNC2Q96PR1 638 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CD180Q99467 661 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 HOPXQ9BPY8 73 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CENPKQ9BS16 269 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 INPP5KQ9BT40 448 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TBCDQ9BTW9 1192 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 FAM192AQ9GZU8 254 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PAIP1Q9H074 479 aaKnown RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 KCNH6Q9H252 994 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ZCCHC4Q9H5U6 513 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 DENND2DQ9H6A0 471 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SLC6A13Q9NSD5 602 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 GID8Q9NWU2 228 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SLC25A37Q9NYZ2 338 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TMEM9Q9P0T7 183 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 TMEM181Q9P2C4 612 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PDP2Q9P2J9 529 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ABCD2Q9UBJ2 740 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 NKX1-2Q9UD57 310 aaPredicted RBP7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 CD300AQ9UGN4 299 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SLC7A8Q9UHI5 535 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 SCOCQ9UIL1 159 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 GMEB2Q9UKD1 530 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 PACSIN3Q9UKS6 424 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 ANGPTL2Q9UKU9 493 aa7.42□□□□□ -1.22
CTHRC1-203ENST00000520337 MAPRE3Q9UPY8 281 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms