RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SLAMF7Q9NQ25 335 aa16.66■□□□□ 0.26
SDC2-205ENST00000520233 DCHS1Q96JQ0 3298 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 LOC102723996A0A087X1L8 192 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 A0A1W2PP18 115 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 OR10H2O60403 315 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 CAPN3P20807 821 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 NCBP2P52298 156 aaKnown RBP eCLIP16.65■□□□□ 0.261e-8■□□□□ 8.1
SDC2-205ENST00000520233 MANFP55145 182 aaKnown RBP16.65■□□□□ 0.26
SDC2-205ENST00000520233 ELAVL1Q15717 326 aaKnown RBP16.65■□□□□ 0.26
SDC2-205ENST00000520233 VPS26BQ4G0F5 336 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 TIGD2Q4W5G0 525 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 SFT2D3Q587I9 215 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 CPEB2Q7Z5Q1 589 aaKnown RBP16.65■□□□□ 0.26
SDC2-205ENST00000520233 RAB43Q86YS6 212 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 OR5P2Q8WZ92 322 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 VPS33AQ96AX1 596 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 PPWD1Q96BP3 646 aaKnown RBP16.65■□□□□ 0.26
SDC2-205ENST00000520233 ERP27Q96DN0 273 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 SLC25A23Q9BV35 468 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 RMND5AQ9H871 391 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 PNO1Q9NRX1 252 aaKnown RBP16.65■□□□□ 0.26
SDC2-205ENST00000520233 WDR70Q9NW82 654 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 BTNL2Q9UIR0 455 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 HS3ST3B1Q9Y662 390 aa16.65■□□□□ 0.26
SDC2-205ENST00000520233 A0A1W2PQ72 361 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 CAPN14A8MX76 684 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 SOCS6O14544 535 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 KLK10O43240 276 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 NT5EP21589 574 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 PRDX6P30041 224 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 OTX2P32243 289 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 IL10RAQ13651 578 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 CYLC2Q14093 348 aaPredicted RBP16.64■□□□□ 0.25
SDC2-205ENST00000520233 TLR1Q15399 786 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 TERF2Q15554 542 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 PPP1R32Q7Z5V6 425 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 TREML1Q86YW5 311 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 FITM2Q8N6M3 262 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 RP9Q8TA86 221 aaKnown RBP16.64■□□□□ 0.25
SDC2-205ENST00000520233 ZNF675Q8TD23 568 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 ADAMTS17Q8TE56 1095 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 VPS50Q96JG6 964 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 CCDC115Q96NT0 180 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 SSUH2Q9Y2M2 353 aa16.64■□□□□ 0.25
SDC2-205ENST00000520233 A8MUA0 341 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 SLITRK5O94991 958 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 C6orf47O95873 294 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 TNNI3P19429 210 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 EFNA1P20827 205 aaPredicted RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 EIF2S3P41091 472 aaKnown RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 MAP4K2Q12851 820 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 SRSF6Q13247 344 aaKnown RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 LTB4RQ15722 352 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 MAPKAPK3Q16644 382 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 SPRED3Q2MJR0 410 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 PRICKLE4Q2TBC4 344 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 UNQ6494/PRO21346Q6UXR6 183 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 DGAT2L6Q6ZPD8 337 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 ZNF551Q7Z340 670 aaPredicted RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 GALNT12Q8IXK2 581 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 CLECL1Q8IZS7 167 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 OR9A2Q8NGT5 310 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 PTPMT1Q8WUK0 201 aaPredicted RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 RIT1Q92963 219 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 C8orf44Q96CB5 159 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 IP6K3Q96PC2 410 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 CCNL2Q96S94 520 aaPredicted RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 MESP1Q9BRJ9 268 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 ZNF700Q9H0M5 742 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 CXorf21Q9HAI6 301 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 TAS2R9Q9NYW1 312 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 MAT2BQ9NZL9 334 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 LEF1Q9UJU2 399 aaPredicted RBP16.63■□□□□ 0.25
SDC2-205ENST00000520233 PCDHGB4Q9UN71 923 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 NDUFAF1Q9Y375 327 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 CLCA3PQ9Y6N3 262 aa16.63■□□□□ 0.25
SDC2-205ENST00000520233 IGHV1-45A0A0A0MS14 117 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 IGHV3-20A0A0C4DH32 117 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 LOC100653049A0A140TA62 436 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 ASPDHA6ND91 283 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 BBIP1A8MTZ0 92 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 C1QTNF9BB2RNN3 333 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 C17orf105B2RV13 164 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 ANGPT2O15123 496 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 DYRK3O43781 588 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 KRT34O76011 436 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 IFI6P09912 130 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 C1QTNF9P0C862 333 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 COX4I1P13073 169 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 EEF1A2Q05639 463 aaKnown RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 MGAT2Q10469 447 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 HSPB3Q12988 150 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 STX5Q13190 355 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 PCOLCEQ15113 449 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 CRTC2Q53ET0 693 aaPredicted RBP16.62■□□□□ 0.25
SDC2-205ENST00000520233 ZNF628Q5EBL2 1059 aa16.62■□□□□ 0.25
SDC2-205ENST00000520233 C6orf163Q5TEZ5 329 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms