RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 KRT35Q92764 455 aa4.69□□□□□ -1.66
PTPN12-213ENST00000519553 FUNDC2Q9BWH2 189 aa4.69□□□□□ -1.66
PTPN12-213ENST00000519553 MEI4A8MW99 385 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 TSPAN2O60636 221 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 GMNNO75496 209 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 PDGFBP01127 241 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-213ENST00000519553 MATKP42679 507 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 GEMP55040 296 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 EMC2Q15006 297 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 KRT31Q15323 416 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 HFEQ30201 348 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 ODF2Q5BJF6 829 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 RNLSQ5VYX0 342 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 REP15Q6BDI9 236 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 ZNF410Q86VK4 478 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 CNTN4Q8IWV2 1026 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 KIAA1524Q8TCG1 905 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 CABS1Q96KC9 395 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 PRAM1Q96QH2 718 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 SPAG8Q99932 426 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-213ENST00000519553 MID1IP1Q9NPA3 183 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 SLC7A10Q9NS82 523 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 SNX5Q9Y5X3 404 aa4.68□□□□□ -1.66
PTPN12-213ENST00000519553 YJEFN3A6XGL0 299 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 RNF212BA8MTL3 300 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 E9PAM4 449 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 FCER2P06734 321 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 HMOX1P09601 288 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 ALDH3B1P43353 468 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 KRTAP10-3P60369 221 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 NPRL3Q12980 569 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 EXOSC7Q15024 291 aaKnown RBP4.67□□□□□ -1.66
PTPN12-213ENST00000519553 RHBDD2Q6NTF9 364 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 COG3Q96JB2 828 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 ST6GALNAC5Q9BVH7 336 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 Q9HAA7 133 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 IL1RL2Q9HB29 575 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 KCNMB3Q9NPA1 279 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 GPR83Q9NYM4 423 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 NARFQ9UHQ1 456 aa4.67□□□□□ -1.66
PTPN12-213ENST00000519553 AGRNO00468 2067 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 A0A1W2PQ72 361 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 TRIM49BA6NDI0 452 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 MCF2LO15068 1137 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 ZNF253O75346 499 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 CXCL14O95715 111 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SFTPBP07988 381 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 FCGR3AP08637 254 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SERPINF2P08697 491 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SLC12A3P55017 1021 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 ACTN3Q08043 901 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 RPA4Q13156 261 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 KLF5Q13887 457 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 ANKRD55Q3KP44 614 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SLC10A5Q5PT55 438 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 LIPJQ5W064 366 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 RTL6Q6ICC9 239 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 STEAP1BQ6NZ63 245 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 CDC42EP5Q6NZY7 148 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 GPR142Q7Z601 462 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SLC22A16Q86VW1 577 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 AGAP11Q8TF27 550 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 SNX21Q969T3 373 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 RAB39BQ96DA2 213 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 RPGRIP1Q96KN7 1286 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 GPR137Q96N19 417 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 FAM213AQ9BRX8 229 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 TMEM245Q9H330 911 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 PRMT8Q9NR22 394 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 PIGVQ9NUD9 493 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 EIF3KQ9UBQ5 218 aaKnown RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 ZNF107Q9UII5 783 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 MRPS2Q9Y399 296 aaKnown RBP4.66□□□□□ -1.66
PTPN12-213ENST00000519553 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
PTPN12-213ENST00000519553 KBTBD11O94819 623 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 REC8O95072 547 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 FERP16591 822 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 CSRP3P50461 194 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 C2orf76Q3KRA6 126 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 NKAIN2Q5VXU1 208 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 ABCA7Q8IZY2 2146 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 SPEM1Q8N4L4 309 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 PSMA8Q8TAA3 256 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 FBXO25Q8TCJ0 367 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 SLCO4A1Q96BD0 722 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 RANBP9Q96S59 729 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 TTYH2Q9BSA4 534 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 CYP39A1Q9NYL5 469 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 AKAP7Q9P0M2 348 aaPredicted RBP4.65□□□□□ -1.67
PTPN12-213ENST00000519553 ARMCX1Q9P291 453 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 MTRRQ9UBK8 725 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 MLXQ9UH92 298 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 ATG4BQ9Y4P1 393 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 KIF7Q2M1P5 1343 aa4.65□□□□□ -1.67
PTPN12-213ENST00000519553 CCER2I3L3R5 266 aa4.64□□□□□ -1.67
PTPN12-213ENST00000519553 TLR4O00206 839 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms