RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 C9orf40Q8IXQ3 194 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 FBXW8Q8N3Y1 598 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 PAQR8Q8TEZ7 354 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 PHF3Q92576 2039 aaKnown RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 RIT1Q92963 219 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ATP6V1E2Q96A05 226 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 MRRFQ96E11 262 aaKnown RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 LRRC46Q96FV0 321 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 JSRP1Q96MG2 331 aaPredicted RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 ERVK-6Q9BXR3 956 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 IPPKQ9H8X2 491 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 ZFP64Q9NPA5 681 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 NPDC1Q9NQX5 325 aaPredicted RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 QPCTLQ9NXS2 382 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 CPSF2Q9P2I0 782 aaKnown RBP10.03□□□□□ -0.8
PVT1-208ENST00000519481 ERVK-19Q9WJR5 959 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 LIPGQ9Y5X9 500 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 C2CD3Q4AC94 2353 aa10.03□□□□□ -0.8
PVT1-208ENST00000519481 SPG11Q96JI7 2443 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 A0A096LPK6 155 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TP53I11O14683 189 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 KLK8O60259 260 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 ZNF354AO60765 605 aaPredicted RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 KLHL2O95198 593 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 ZWINTO95229 277 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 FAM58BPP0C7Q3 252 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 GLI4P10075 376 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 MTHFD2P13995 350 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TYK2P29597 1187 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 GALNSP34059 522 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TMED10P49755 219 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 NR0B1P51843 470 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 HNRNPH2P55795 449 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 RPP38P78345 283 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 TFF3Q07654 80 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 CUL3Q13618 768 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 PCBP2Q15366 365 aaKnown RBP eCLIP10.02□□□□□ -0.811e-6■■□□□ 11.6
PVT1-208ENST00000519481 CPSF6Q16630 551 aaKnown RBP eCLIP10.02□□□□□ -0.81
PVT1-208ENST00000519481 SLC25A35Q3KQZ1 300 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TBCELQ5QJ74 424 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 RIPPLY2Q5TAB7 128 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 PRAMEF20Q5VT98 475 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TMEM198Q66K66 360 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 METTL2BQ6P1Q9 378 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 NUDT13Q86X67 352 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 RNF175Q8N4F7 328 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 ZNF597Q96LX8 424 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 SERPINI1Q99574 410 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 DOHHQ9BU89 302 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 WWTR1Q9GZV5 400 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 DDX31Q9H8H2 851 aaKnown RBP10.02□□□□□ -0.81
PVT1-208ENST00000519481 SNX15Q9NRS6 342 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 PSD3Q9NYI0 1048 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 AHSPQ9NZD4 102 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 TNFRSF10DQ9UBN6 386 aa10.02□□□□□ -0.81
PVT1-208ENST00000519481 A0A0A6YYD5 115 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 C2orf92A0A1B0GVN3 265 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 GLOD5A6NK44 160 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 HRKO00198 91 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 FOXE1O00358 373 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 EEDO75530 441 aaKnown RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 PRKRAO75569 313 aaKnown RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 SEMA3DO95025 777 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 CLDN9O95484 217 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 NADKO95544 446 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 CELA3AP09093 270 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 SLC35E2P0CK97 266 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 CD1EP15812 388 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 GDF1P27539 372 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 PIK3R1P27986 724 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 PEX19P40855 299 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 SERPINB8P50452 374 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 CCNG1P51959 295 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 NRG3P56975 720 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 SLC37A1P57057 533 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 IRF9Q00978 393 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 EBPQ15125 230 aaKnown RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.812e-9■■■□□ 17.6
PVT1-208ENST00000519481 C10orf62Q5T681 223 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 TTC19Q6DKK2 380 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 OR52E8Q6IFG1 317 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 MRM1Q6IN84 353 aaKnown RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 SPNS3Q6ZMD2 512 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 DGAT2L6Q6ZPD8 337 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 TAOK1Q7L7X3 1001 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 PAGE2Q7Z2X7 111 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 GOLGA7Q7Z5G4 137 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 WDR53Q7Z5U6 358 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 CENPLQ8N0S6 344 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 OR10G3Q8NGC4 313 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 NEIL3Q8TAT5 605 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 DOK4Q8TEW6 326 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 DIO2Q92813 273 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 VPS11Q9H270 941 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 SH2D2AQ9NP31 389 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 ACKR4Q9NPB9 350 aa10.01□□□□□ -0.81
PVT1-208ENST00000519481 SEMA4BQ9NPR2 832 aaPredicted RBP10.01□□□□□ -0.81
PVT1-208ENST00000519481 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms