RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SCN8AQ9UQD0 1980 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 PRRC2BQ5JSZ5 2229 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 LAMA2P24043 3122 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 C1orf232A0A0U1RR37 186 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SLC22A23A1A5C7 686 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 LINC01553A4QN01 128 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 DPPA5A6NC42 116 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TRPC5OSA6NMA1 111 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 HSPB2A8KAH6 182 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 IQCF5A8MTL0 148 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SMIM24O75264 130 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TBX10O75333 385 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 VPS26AO75436 327 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 NEURL1O76050 574 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SUPT7LO94864 414 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ANP32DO95626 131 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 IGSF6O95976 241 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 EZRP15311 586 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 EPCAMP16422 314 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CEBPBP17676 345 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 IMPDH1P20839 514 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 LHCGRP22888 699 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 RPS3P23396 243 aaKnown RBP eCLIP4.59□□□□□ -1.671e-10■■□□□ 12.6
CTNNA1-212ENST00000518919 EEF1DP29692 281 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 HMGCLP35914 325 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 HELZP42694 1942 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CAPZA2P47755 286 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TTPAP49638 278 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ERFP50548 548 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 NUDT2P50583 147 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ATP4BP51164 291 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 THOP1P52888 689 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ADARP55265 1226 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CDH13P55290 713 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ATP6V0D1P61421 351 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 NTHL1P78549 312 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 COL4A3Q01955 1670 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CACNG1Q06432 222 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 RAD51Q06609 339 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 BCL2L1Q07817 233 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ACSM2AQ08AH3 577 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 PMPCAQ10713 525 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 PPIGQ13427 754 aaKnown RBP eCLIP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SQLEQ14534 574 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 HSPB2Q16082 182 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ALG10Q5BKT4 473 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CMPK2Q5EBM0 449 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 FBXO48Q5FWF7 155 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TCEAL5Q5H9L2 206 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ALG10BQ5I7T1 473 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 C1orf146Q5VVC0 180 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ACSM2BQ68CK6 577 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 REP15Q6BDI9 236 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 UGT3A1Q6NUS8 523 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 LCTLQ6UWM7 567 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 FAM151BQ6UXP7 276 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 RFLNAQ6ZTI6 216 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TSPAN33Q86UF1 283 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TRIM74Q86UV6 250 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TRIM73Q86UV7 250 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 KBTBD6Q86V97 674 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SERPINA9Q86WD7 417 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TMEM25Q86YD3 366 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 DEFB107AQ8IZN7 70 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CADM3Q8N126 398 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 STK40Q8N2I9 435 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 FBXO39Q8N4B4 442 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 DPP10Q8N608 796 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SNX31Q8N9S9 440 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 PNLDC1Q8NA58 520 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 OR4N2Q8NGD1 307 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 OR2AP1Q8NGE2 309 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 DTX3LQ8TDB6 740 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TWIST2Q8WVJ9 160 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SGCDQ92629 289 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CCDC124Q96CT7 223 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ECHDC3Q96DC8 303 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 CMTM5Q96DZ9 223 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 C19orf60Q96EN9 201 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SLC45A3Q96JT2 553 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 C3orf30Q96M34 536 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 KCNA7Q96RP8 456 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 MCCC1Q96RQ3 725 aaPredicted RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 LYSMD1Q96S90 227 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ZNF106Q9H2Y7 1883 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TUBB1Q9H4B7 451 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ATP13A3Q9H7F0 1226 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 DCLRE1BQ9H816 532 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 ERVMER34-1Q9H9K5 563 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 EML4Q9HC35 981 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 NMRK1Q9NWW6 199 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TAS2R13Q9NYV9 303 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 NUDT4Q9NZJ9 180 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 STX18Q9P2W9 335 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 SERGEFQ9UGK8 458 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 TRMT6Q9UJA5 497 aaKnown RBP4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 PCTPQ9UKL6 214 aa4.59□□□□□ -1.67
CTNNA1-212ENST00000518919 PACSIN3Q9UKS6 424 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms