RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SCARB1Q8WTV0 552 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC35F5Q8WV83 523 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ASB10Q8WXI3 467 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 IRGQQ8WZA9 623 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ANKRD7Q92527 254 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 P3H4Q92791 437 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB1CQ92928 201 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM19Q96HH6 336 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 AKR1E2Q96JD6 320 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 AMDHD1Q96NU7 426 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACCSQ96QU6 501 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 AGPAT1Q99943 283 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRAF4Q9BUZ4 470 aaPredicted RBP3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 NLNQ9BYT8 704 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 DCLK3Q9C098 648 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 MFFQ9GZY8 342 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 MIS12Q9H081 205 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 RHOJQ9H4E5 214 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 TLE6Q9H808 572 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 LPAR2Q9HBW0 351 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 LRRC4Q9HBW1 653 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 PCDH9Q9HC56 1237 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 MRPL47Q9HD33 250 aaKnown RBP3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPAG4Q9NPE6 437 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 NOX4Q9NPH5 578 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLC52A3Q9NQ40 469 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 C20orf96Q9NUD7 363 aaPredicted RBP3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 UFSP2Q9NUQ7 469 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 SMOXQ9NWM0 555 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 IL20Q9NYY1 176 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 NLGN3Q9NZ94 848 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 WWOXQ9NZC7 414 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 MTCH1Q9NZJ7 389 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 PIPOXQ9P0Z9 390 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 DAPK2Q9UIK4 370 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 TINAGQ9UJW2 476 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 PILRAQ9UKJ1 303 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 EMCNQ9ULC0 261 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ATP6V1DQ9Y5K8 247 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 COLEC10Q9Y6Z7 277 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 NEURL4Q96JN8 1562 aa3.63□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZCCHC6Q5VYS8 1495 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 ATP6AP2A0A1C7CYW4 349 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 A0A1W2PP11 408 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 LOC390937A0A1W2PQ73 354 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 MTMR11A4FU01 709 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 F8VZ95 297 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 BCKDKO14874 412 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 ARPC2O15144 300 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 STX7O15400 261 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 NBR2O15453 112 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 FOXS1O43638 330 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CRTAPO75718 401 aaPredicted RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDUFA7O95182 113 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 EML2O95834 649 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CLPTM1O96005 669 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 WNT11O96014 354 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 HPRP00739 348 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CST1P01037 141 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 VTNP04004 478 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CRYGBP07316 175 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PLEKP08567 350 aaPredicted RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCNB1P14635 433 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 UQCRBP14927 111 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PI3P19957 117 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 SPINK2P20155 84 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 HNRNPH3P31942 346 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 MPLP40238 635 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAGEA9P43362 315 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDST1P52848 882 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PGGT1BP53609 377 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PLA2G16P53816 162 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PPIAP62937 165 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 IRF8Q02556 426 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CEACAM7Q14002 265 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 KRT81Q14533 505 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 MICBQ29980 383 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 ITPRIPL2Q3MIP1 535 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 TMEM119Q4V9L6 283 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 C6orf226Q5I0X4 101 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 PDZK1Q5T2W1 519 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 LCN1P1Q5VSP4 162 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 LYPLAL1Q5VWZ2 237 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 KIAA0895LQ68EN5 471 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CDC42EP5Q6NZY7 148 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 UQCC3Q6UW78 93 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CWC27Q6UX04 472 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CEACAM20Q6UY09 585 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 C17orf107Q6ZR85 190 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 Q7L0L9 218 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRMT10CQ7L0Y3 403 aaKnown RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 NDUFAF7Q7L592 441 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 C5orf24Q7Z6I8 188 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 ATG4DQ86TL0 474 aaPredicted RBP3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACOT1Q86TX2 421 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPBP1Q86WP2 473 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 CDK20Q8IZL9 346 aa3.62□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM58AQ8N1B3 248 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms