RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 VPS29Q9UBQ0 182 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 COPS7AQ9UBW8 275 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 PLEKHB1Q9UF11 243 aaPredicted RBP10.65□□□□□ -0.7
VCAN-212ENST00000515397 GRID1Q9ULK0 1009 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 PPT2Q9UMR5 302 aa10.65□□□□□ -0.7
VCAN-212ENST00000515397 MAST4O15021 2626 aa10.65□□□□□ -0.71
VCAN-212ENST00000515397 ASPDHA6ND91 283 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 FAM166BA8MTA8 275 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 ASNA1O43681 348 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 HS6ST1O60243 411 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CDH16O75309 829 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 NME6O75414 186 aaPredicted RBP10.64□□□□□ -0.71
VCAN-212ENST00000515397 LRATO95237 230 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 ESRRBO95718 433 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 MLYCDO95822 493 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CLDN1O95832 211 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 KRT6AP02538 564 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CLPSP04118 112 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 KRT6BP04259 564 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 SLC35E2P0CK97 266 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 GP1BBP13224 206 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 NT5EP21589 574 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 PIK3R1P27986 724 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CRHR1P34998 444 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 KRT6CP48668 564 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 ARFIP1P53367 373 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 RAE1P78406 368 aaKnown RBP10.64□□□□□ -0.71
VCAN-212ENST00000515397 SLC18A2Q05940 514 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 LCP2Q13094 533 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 C3AR1Q16581 482 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 C4orf17Q53FE4 359 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 PIGGQ5H8A4 983 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CFAP157Q5JU67 520 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 SPDYAQ5MJ70 313 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 OR52E8Q6IFG1 317 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 FAM111BQ6SJ93 734 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 C3P1Q6ZMU1 363 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
VCAN-212ENST00000515397 PAGE2Q7Z2X7 111 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 LCA5Q86VQ0 697 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 C10orf107Q8IVU9 208 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 SIAH3Q8IW03 269 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 SRRM1Q8IYB3 904 aaKnown RBP10.64□□□□□ -0.71
VCAN-212ENST00000515397 MYRIPQ8NFW9 859 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 OR4K14Q8NGD5 310 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 OR5L2Q8NGL0 311 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 OR5M3Q8NGP4 307 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 AGAP11Q8TF27 550 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 AENQ8WTP8 325 aaKnown RBP10.64□□□□□ -0.71
VCAN-212ENST00000515397 PARD6BQ9BYG5 372 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 DEFB127Q9H1M4 99 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 SLC17A7Q9P2U7 560 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 HEY2Q9UBP5 337 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 TINAGQ9UJW2 476 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 CES1P1Q9UKY3 287 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 FIS1Q9Y3D6 152 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 PCDHGB6Q9Y5F9 930 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 PCDHA9Q9Y5H5 950 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 PTGDR2Q9Y5Y4 395 aa10.64□□□□□ -0.71
VCAN-212ENST00000515397 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 ESPNB1AK53 854 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CDC40O60508 579 aaKnown RBP eCLIP10.63□□□□□ -0.71
VCAN-212ENST00000515397 IL3P08700 152 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 STSP08842 583 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CCL3P10147 92 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CPMP14384 443 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 PORP16435 677 aaPredicted RBP10.63□□□□□ -0.71
VCAN-212ENST00000515397 ZNF24P17028 368 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 DEKP35659 375 aaKnown RBP10.63□□□□□ -0.71
VCAN-212ENST00000515397 PIGAP37287 484 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 PKNOX1P55347 436 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 SLC37A1P57057 533 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 EXOSC7Q15024 291 aaKnown RBP10.63□□□□□ -0.71
VCAN-212ENST00000515397 LTB4RQ15722 352 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CCDC153Q494R4 210 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CLEC6AQ6EIG7 209 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 RNF111Q6ZNA4 994 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 FGD2Q7Z6J4 655 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 PRR22Q8IZ63 422 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 PSD4Q8NDX1 1056 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 OR52N2Q8NGI0 321 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CDC26Q8NHZ8 85 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 FBXL20Q96IG2 436 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 GPR137Q96N19 417 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 MECRQ9BV79 373 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 GATA5Q9BWX5 397 aaPredicted RBP10.63□□□□□ -0.71
VCAN-212ENST00000515397 ANKRA2Q9H9E1 313 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 CXorf21Q9HAI6 301 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 BRF2Q9HAW0 419 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 TIMMDC1Q9NPL8 285 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 OXSMQ9NWU1 459 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 DLGAP4Q9Y2H0 992 aa10.63□□□□□ -0.71
VCAN-212ENST00000515397 KLF13Q9Y2Y9 288 aaPredicted RBP10.63□□□□□ -0.71
VCAN-212ENST00000515397 CROCCQ5TZA2 2017 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 GNG14A0A1W2PPG7 69 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 KLRC4-KLRK1H3BQV0 150 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 CCL21O00585 134 aa10.62□□□□□ -0.71
VCAN-212ENST00000515397 TFECO14948 347 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms