RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 APOL3O95236 402 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 ITGALP20701 1170 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 GALP22466 123 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 ITPKAP23677 461 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 RFX3P48380 749 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 CTBP2P56545 445 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 CYP4F8P98187 520 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 DHODHQ02127 395 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 CACNG1Q06432 222 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 GCNT6Q5T4J0 391 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 NBPF12Q5TAG4 269 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 FAM198BQ6UWH4 519 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 WASH2PQ6VEQ5 465 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 KRT74Q7RTS7 529 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 LRRC28Q86X40 367 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 DENND1CQ8IV53 801 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 ATOH1Q92858 354 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 SLC6A18Q96N87 628 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 NPAS1Q99742 590 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 TCF25Q9BQ70 676 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 DUSP26Q9BV47 211 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 FGF20Q9NP95 211 aaPredicted RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 CYSLTR2Q9NS75 346 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 REV1Q9UBZ9 1251 aa12.2□□□□□ -0.46
SMAD1-215ENST00000515385 EXO1Q9UQ84 846 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 EXOSC1Q9Y3B2 195 aaKnown RBP12.2□□□□□ -0.46
SMAD1-215ENST00000515385 KCNE1BA0A087WTH5 132 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 RRN3P2A6NIE6 340 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 LRRC72A6NJI9 287 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 MPTX1A8MV57 137 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 APOC1P02654 83 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 TCRBP04435 133 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 HLA-DPB1P04440 258 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 FGF2P09038 288 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 ZNF7P17097 686 aaPredicted RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 CXCL3P19876 107 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 RBMS1P29558 406 aaKnown RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 ETV5P41161 510 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 OR1E2P47887 323 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 FABP5Q01469 135 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 CSTF1Q05048 431 aaKnown RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 MS4A13Q5J8X5 152 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 PAQR6Q6TCH4 344 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 LRRC70Q7Z2Q7 622 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 SLC30A8Q8IWU4 369 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 CLECL1Q8IZS7 167 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 NAGSQ8N159 534 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 L3MBTL4Q8NA19 623 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 SENP5Q96HI0 755 aaPredicted RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 POLDIP3Q9BY77 421 aaKnown RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 TMEM38AQ9H6F2 299 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 ZSCAN32Q9NX65 697 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 CBLCQ9ULV8 474 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 PIN4Q9Y237 131 aaKnown RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 MRPL42Q9Y6G3 142 aaKnown RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 DNMT3AQ9Y6K1 912 aaPredicted RBP12.19□□□□□ -0.46
SMAD1-215ENST00000515385 MCM3APO60318 1980 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 BPTFQ12830 3046 aa12.19□□□□□ -0.46
SMAD1-215ENST00000515385 DRGXA6NNA5 263 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 IQCF5A8MTL0 148 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 F8W036 122 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 LINC01387J3KSC0 135 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 AIPO00170 330 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
SMAD1-215ENST00000515385 GJB3O75712 270 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 ANXA5P08758 320 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 ZNF3P17036 446 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 CALCRP30988 508 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 BTCP35070 178 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 XKP51811 444 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 RELQ04864 619 aaPredicted RBP12.18□□□□□ -0.46
SMAD1-215ENST00000515385 SCARB2Q14108 478 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 RAET1GQ6H3X3 334 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 TMIGD1Q6UXZ0 262 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 USP45Q70EL2 814 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 CCDC36Q8IYA8 594 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 FTMTQ8N4E7 242 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 OR5M3Q8NGP4 307 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 ADAMTS19Q8TE59 1207 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 MAL2Q969L2 176 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 KCTD12Q96CX2 325 aaKnown RBP12.18□□□□□ -0.46
SMAD1-215ENST00000515385 FUBP3Q96I24 572 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMAD1-215ENST00000515385 HIST1H2AHQ96KK5 128 aa12.18□□□□□ -0.46
SMAD1-215ENST00000515385 ACBD6Q9BR61 282 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms