RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 WSB2Q9NYS7 404 aaPredicted RBP7.04□□□□□ -1.28
CLIP1-205ENST00000514271 EHD3Q9NZN3 535 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 HCN2Q9UL51 889 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 STUB1Q9UNE7 303 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 TPRKBQ9Y3C4 175 aa7.04□□□□□ -1.28
CLIP1-205ENST00000514271 MYOFQ9NZM1 2061 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 A0A0D9SEW6 157 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 UPK3BL1B0FP48 263 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 UPK3BL2E5RIL1 263 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 B3GALT4O96024 378 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 IL7P13232 177 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 RPS2P15880 293 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CPEP16870 476 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM11P17152 192 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 FGF9P31371 208 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ACVRL1P37023 503 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SERPINB10P48595 397 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 DGKQP52824 942 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 COPZ1P61923 177 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 PDE7AQ13946 482 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GAS6Q14393 721 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GFOD2Q3B7J2 385 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SNAP47Q5SQN1 464 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SYTL1Q8IYJ3 562 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 MAML2Q8IZL2 1156 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 DEPDC4Q8N2C3 294 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF366Q8N895 744 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 OR52K2Q8NGK3 314 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 LHFPL5Q8TAF8 219 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 WDR20Q8TBZ3 569 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF675Q8TD23 568 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 DNASE2BQ8WZ79 361 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 COQ8BQ96D53 544 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TMCO6Q96DC7 493 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 MAP6Q96JE9 813 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ACPTQ9BZG2 426 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ROGDIQ9GZN7 287 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TRIM39Q9HCM9 518 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 PRDM8Q9NQV8 689 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TAS2R9Q9NYW1 312 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF221Q9UK13 617 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SNX7Q9UNH6 387 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ARL5AQ9Y689 179 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CDH10Q9Y6N8 788 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CPAMD8Q8IZJ3 1885 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ASNA1O43681 348 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 RPLP0P05388 317 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 THBS2P35442 1172 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 XCR1P46094 333 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ALDH9A1P49189 494 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 RPS21P63220 83 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ABRQ12979 859 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 KRR1Q13601 381 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TSNQ15631 228 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ESCO2Q56NI9 601 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GPRC6AQ5T6X5 926 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ARMC12Q5T9G4 340 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ZBTB37Q5TC79 503 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SLC6A19Q695T7 634 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ERICH5Q6P6B1 374 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 USP45Q70EL2 814 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 DPPA4Q7L190 304 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SLC9B2Q86UD5 537 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 STK32CQ86UX6 486 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ELMOD2Q8IZ81 293 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 OR4F6Q8NGB9 312 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 OR6C4Q8NGE1 309 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 RORBQ92753 470 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 UPRTQ96BW1 309 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CDKN2AIPNLQ96HQ2 116 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 INPP5KQ9BT40 448 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 IGHV1OR15-9A0A0B4J2B8 117 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ANKRD61A6NGH8 418 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 FFAR1O14842 300 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 PROM1O43490 865 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SC5DO75845 299 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SERPINA1P01009 418 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ESR1P03372 595 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 FGF1P05230 155 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF883P0CG24 379 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 HOXB3P14651 431 aaPredicted RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GALP22466 123 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 ABATP80404 500 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 PFKFB4Q16877 469 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM92Q6UXU6 159 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 TFAP2EQ6VUC0 442 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 Q6ZS52 159 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GPRIN3Q6ZVF9 776 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 STK40Q8N2I9 435 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GRPEL2Q8TAA5 225 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CYB5D2Q8WUJ1 264 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 METTL2AQ96IZ6 378 aaKnown RBP7.03□□□□□ -1.28
CLIP1-205ENST00000514271 COL21A1Q96P44 957 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 SLC29A3Q9BZD2 475 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 GHITMQ9H3K2 345 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 MARCH7Q9H992 704 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 CD93Q9NPY3 652 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms