RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FAM69AQ5T7M9 428 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 TMEM65Q6PI78 240 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 IGFN1Q86VF2 1251 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 OR1N1Q8NGS0 311 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 S1PR3Q99500 378 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NTMT1Q9BV86 223 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 BARHL1Q9BZE3 327 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 HTRA2O43464 458 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 TSHRP16473 764 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PRKCAP17252 672 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CD72P21854 359 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 AK4P27144 223 aaPredicted RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 UGT2B10P36537 528 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SNCAP37840 140 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 RPL13AP40429 203 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 PKP1Q13835 747 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PRAMEF8Q5VWM4 474 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 PRAMEF7Q5VXH5 474 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 METTL2BQ6P1Q9 378 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 LGI4Q8N135 537 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 CCDC28BQ9BUN5 200 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 POLR2J3Q9H1A7 115 aaKnown RBP8.56□□□□□ -1.04
VCAN-208ENST00000512590 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 SLC5A6Q9Y289 635 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 WDR45Q9Y484 360 aa8.56□□□□□ -1.04
VCAN-208ENST00000512590 NPIPA5A0A0B4J1W7 369 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 NPIPA7E9PJI5 369 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 K7EQM0 130 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 NPIPA8P0DM63 369 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PNMTP11086 282 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 RPL7P18124 248 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 TGM4P49221 684 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 GPR143P51810 404 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ART1P52961 327 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ACTG1P63261 375 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 EEF1DP3Q658K8 133 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 BTNL3Q6UXE8 466 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 NLRC3Q7RTR2 1065 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 LDB1Q86U70 411 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 THOC6Q86W42 341 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 CLIP4Q8N3C7 705 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CCDC71LQ8N9Z2 235 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 OR9A1PQ8NGU1 263 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 OR1S1Q8NH92 325 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CYP2W1Q8TAV3 490 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 HRASLS5Q96KN8 279 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CHRDQ9H2X0 955 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 PPM1HQ9ULR3 514 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 MST1RQ04912 1400 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 A0A0J9YYE9 177 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 OR5K3A6NET4 321 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 BBIP1A8MTZ0 92 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ANGPTL7O43827 346 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ZNF182P17025 639 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 FOXN2P32314 431 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 INCA1Q0VD86 236 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ASTE1Q2TB18 679 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 ZNF440Q8IYI8 595 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CPSF7Q8N684 471 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 SHKBP1Q8TBC3 707 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ACOT11Q8WXI4 607 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 PPM1MQ96MI6 270 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 UBL7Q96S82 380 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 SLC25A51Q9H1U9 297 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 RANBP3Q9H6Z4 567 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 RAP2CQ9Y3L5 183 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ARHGEF5Q12774 1597 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 BCKDKO14874 412 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CKMT1AP12532 417 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 GIFP27352 417 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PRDX3P30048 256 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 PCBD1P61457 104 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ADGRE1Q14246 886 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 RBM20Q5T481 1227 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 KDM4DQ6B0I6 523 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 OPN5Q6U736 354 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 TAC4Q86UU9 113 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 WDR31Q8NA23 367 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 TWIST2Q8WVJ9 160 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 MOAP1Q96BY2 351 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ZNF845Q96IR2 970 aaPredicted RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 EGFL7Q9UHF1 273 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ERVK-7P63135 1459 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 A0A1B0GTW7 788 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 IGLON5A6NGN9 336 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 FAM90A27PA6NNH2 459 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PIGRP01833 764 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 CDH1P12830 882 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PCSK2P16519 638 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 PTPN4P29074 926 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 SOX9P48436 509 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 TMEM207Q6UWW9 146 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 RBM44Q6ZP01 1051 aaKnown RBP8.55□□□□□ -1.04
VCAN-208ENST00000512590 C14orf80Q86SX3 495 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 ZNF695Q8IW36 515 aa8.55□□□□□ -1.04
VCAN-208ENST00000512590 HDAC7Q8WUI4 952 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms