RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 MED28Q9H204 178 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 KCNN3Q9UGI6 736 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 SPAG17Q6Q759 2223 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 ARPC4-TTLL3A0A0A6YYG9 625 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 A0A1B0GVT2 93 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 DRGXA6NNA5 263 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 CDK2AP1O14519 115 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 UPK1BO75841 260 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 CD2P06729 351 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 OR3A3P47888 321 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 DNASE1L1P49184 302 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 USP53Q70EK8 1073 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 LINGO2Q7L985 606 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 TMPRSS9Q7Z410 1059 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 LSMEM1Q8N8F7 131 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 OR56A1Q8NGH5 318 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 MMABQ96EY8 250 aaPredicted RBP13.6□□□□□ -0.23
PRDM16-206ENST00000511072 GINS4Q9BRT9 223 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 HSPB11Q9Y547 144 aa13.6□□□□□ -0.23
PRDM16-206ENST00000511072 A0A1W2PPK0 400 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 OR6C74A6NCV1 312 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ATP6V1G2-DDX39BF2Z307 99 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PRMT3O60678 531 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ECDO95905 644 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ATXN1LP0C7T5 689 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ADRB3P13945 408 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 GPX3P22352 226 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 CST6Q15828 149 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 LCN8Q6JVE9 175 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 OR8H3Q8N146 312 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PGBD5Q8N414 524 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 KLHDC7BQ96G42 594 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 SLC39A13Q96H72 371 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 SORBS1Q9BX66 1292 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 CHIAQ9BZP6 476 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PLEKHA1Q9HB21 404 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 FAM118AQ9NWS6 357 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 NLGN3Q9NZ94 848 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 SOX30O94993 753 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 CSN2P05814 226 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 CXCR1P25024 350 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PDHA2P29803 388 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ZNF140P52738 457 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ADNP2Q6IQ32 1131 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 FIGNL1Q6PIW4 674 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 NXPE4Q6UWF7 544 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PROKR2Q8NFJ6 384 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 BEX1Q9HBH7 125 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PRAMEF33A0A0G2JMD5 474 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 HMX2A2RU54 273 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ALDOCP09972 364 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 MPC1LP0DKB6 136 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 GSTM3P21266 225 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 AGXTP21549 392 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 IL32P24001 234 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ACSL1P33121 698 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 KCNC1P48547 511 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 RPS21P63220 83 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ZFP41Q8N8Y5 198 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 THAP3Q8WTV1 239 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 TM9SF2Q99805 663 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 KLF16Q9BXK1 252 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 MARK1Q9P0L2 795 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 RPS17P08708 135 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 EIF1AXP47813 144 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ARFIP1P53367 373 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 EIF4HQ15056 248 aaKnown RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 OR5P2Q8WZ92 322 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 CSF3RQ99062 836 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 GPR174Q9BXC1 333 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
PRDM16-206ENST00000511072 USP22Q9UPT9 525 aa13.59□□□□□ -0.23
PRDM16-206ENST00000511072 AHDC1Q5TGY3 1603 aaPredicted RBP13.58□□□□□ -0.23
PRDM16-206ENST00000511072 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 ZNF821O75541 412 aaPredicted RBP13.58□□□□□ -0.24
PRDM16-206ENST00000511072 SDC1P18827 310 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 GABRA3P34903 492 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 CDK10Q15131 360 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 DEFB110Q30KQ9 67 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 KCTD11Q693B1 232 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 RPL3LQ92901 407 aaKnown RBP13.58□□□□□ -0.24
PRDM16-206ENST00000511072 TMEM125Q96AQ2 219 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 TMCO6Q96DC7 493 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
PRDM16-206ENST00000511072 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms