RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 PIK3IP1Q96FE7 263 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 FBXL20Q96IG2 436 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 RILPQ96NA2 401 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 GNRHR2Q96P88 292 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 PIP5K1AQ99755 562 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TM9SF2Q99805 663 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 PELOQ9BRX2 385 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 WDR83Q9BRX9 315 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 CENPKQ9BS16 269 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 EFCAB11Q9BUY7 163 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ERVK-6Q9BXR3 956 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 PRDM14Q9GZV8 571 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ACBD3Q9H3P7 528 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 RPF2Q9H7B2 306 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 SH2D2AQ9NP31 389 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 MS4A12Q9NXJ0 267 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 GALNT8Q9NY28 637 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 SLC17A6Q9P2U8 582 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 ERVK-19Q9WJR5 959 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 CHCHD2Q9Y6H1 151 aaPredicted RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 MBD3L4A6NDZ8 208 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 MBD3L3A6NE82 208 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 TRIM64A6NGJ6 449 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 TRIM64BA6NI03 449 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 MBD3L5A6NJ08 208 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 HRKO00198 91 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 SAP18O00422 153 aaKnown RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 GNB5O14775 395 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 CCNT2O60583 730 aaKnown RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 TRIM3O75382 744 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 BANF1O75531 89 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 STK16O75716 305 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 TGFB1P01137 390 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 HPNP05981 417 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 HIST1H1TP22492 207 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 MAGEA3P43357 314 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 TMED10P49755 219 aaKnown RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 FBXW4P57775 412 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 EEF1A1P68104 462 aaKnown RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 PCDH1Q08174 1060 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 PPP1R3AQ16821 1122 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 EIPR1Q53HC9 387 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 HP1BP3Q5SSJ5 553 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 TEDDM1Q5T9Z0 273 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 EEF1A1P5Q5VTE0 462 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 POMZP3Q6PJE2 187 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 SCIMPQ6UWF3 145 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 ENPP6Q6UWR7 440 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 PRSS57Q6UWY2 283 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 LYPD8Q6UX82 237 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 CHMP1BQ7LBR1 199 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 GALNT7Q86SF2 657 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 CNTN4Q8IWV2 1026 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 NAT8LQ8N9F0 302 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 C9orf106Q8NAJ2 232 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 MBD3L2Q8NHZ7 208 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 RIT1Q92963 219 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 UCN3Q969E3 161 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 RHBDF1Q96CC6 855 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 WDYHV1Q96HA8 205 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 FAM111AQ96PZ2 611 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 NAP1L3Q99457 506 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 SFXN3Q9BWM7 321 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 WWTR1Q9GZV5 400 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 PIGMQ9H3S5 423 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 EHD1Q9H4M9 534 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 METTL7AQ9H8H3 244 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 WDR41Q9HAD4 459 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 PROK2Q9HC23 129 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 SNX15Q9NRS6 342 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 RYDENQ9NUL5 291 aaKnown RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 TEX10Q9NXF1 929 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 ZNF226Q9NYT6 803 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 CD274Q9NZQ7 290 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 ASIC3Q9UHC3 531 aa9.47□□□□□ -0.89
MBD4-208ENST00000509828 ZNF490Q9ULM2 529 aaPredicted RBP9.47□□□□□ -0.89
MBD4-208ENST00000509828 FAM95CA0A1B0GW59 222 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 ANKRD33BA6NCL7 494 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 OR6C76A6NM76 312 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 RNF212BA8MTL3 300 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 SNPHO15079 494 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.94e-6■■■■□ 21.7
MBD4-208ENST00000509828 ACTL6AO96019 429 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 IGKV3-11P04433 115 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 EPB42P16452 691 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 ZNF37AP17032 561 aaPredicted RBP9.46□□□□□ -0.9
MBD4-208ENST00000509828 BUD31P41223 144 aaPredicted RBP9.46□□□□□ -0.9
MBD4-208ENST00000509828 SLC6A12P48065 614 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 HSPA7P48741 367 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 CHIT1Q13231 466 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 GAB1Q13480 694 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 DDX39BQ13838 428 aaKnown RBP9.46□□□□□ -0.9
MBD4-208ENST00000509828 RPS6KA2Q15349 733 aa9.46□□□□□ -0.9
MBD4-208ENST00000509828 ACKR1Q16570 336 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms