RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 RGS13O14921 159 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 TMEM63AO94886 807 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 GADD45GO95257 159 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LINC00032P0C843 101 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 AKAIN1P0CW23 69 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR5H8P0DN80 308 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC2A1P11166 492 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF20P17024 532 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 JUNBP17275 347 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 F2RP25116 425 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OXTRP30559 389 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FMO4P31512 558 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 S100A11P31949 105 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ARL2P36404 184 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MCAMP43121 646 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 RFX2P48378 723 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MMP15P51511 669 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 BCAT1P54687 386 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 DVL1P1P54792 670 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 RAP1AP62834 184 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SP3Q02447 781 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ARHGAP19Q14CB8 494 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 AMZ1Q400G9 498 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 IGSF11Q5DX21 431 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 XKR4Q5GH76 650 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CPTPQ5TA50 214 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 STEAP4Q687X5 459 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF343Q6P1L6 599 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 FRRS1Q6ZNA5 592 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF704Q6ZNC4 412 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 ABHD12BQ7Z5M8 362 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 ADCK2Q7Z695 626 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TSPYL5Q86VY4 417 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 LRRC28Q86X40 367 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 TREML1Q86YW5 311 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LURAP1LQ8IV03 231 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TBC1D10CQ8IV04 446 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ENTHD1Q8IYW4 607 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 NAGSQ8N159 534 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LINC00116Q8NCU8 138 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR10G2Q8NGC3 310 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR52H1Q8NGJ2 320 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 OR10Z1Q8NGY1 313 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TRAPPC12Q8WVT3 735 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SELENOMQ8WWX9 145 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 PHYHIPLQ96FC7 376 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZFP3Q96NJ6 502 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TMEM74Q96NL1 305 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ACOX2Q99424 681 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ARHGDIGQ99819 225 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 WACQ9BTA9 647 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TEX101Q9BY14 249 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC29A3Q9BZD2 475 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.44□□□□□ -1.86
USP53-205ENST00000509769 MTIF3Q9H2K0 278 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 PLK3Q9H4B4 646 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 TFB2MQ9H5Q4 396 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 CHST12Q9NRB3 414 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 LRIT1Q9P2V4 623 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MRPS33Q9Y291 106 aaKnown RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 GOLT1BQ9Y3E0 138 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 MAFBQ9Y5Q3 323 aaPredicted RBP3.44□□□□□ -1.86
USP53-205ENST00000509769 SLC22A7Q9Y694 548 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 CSNK1G3Q9Y6M4 447 aa3.44□□□□□ -1.86
USP53-205ENST00000509769 ZNF521Q96K83 1311 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ELOA3DA6NLF2 546 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 F5H5T6 163 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FAAHO00519 579 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CYB5BO43169 146 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PCDH7O60245 1069 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CST2P09228 141 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 HNRNPLP14866 589 aaKnown RBP eCLIP3.43□□□□□ -1.86
USP53-205ENST00000509769 BMP5P22003 454 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 HTR1EP28566 365 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 HOXA9P31269 272 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ETV4P43268 484 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 MASP1P48740 699 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SLC11A2P49281 568 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PLK1P53350 603 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TCL1AP56279 114 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 P2RX3P56373 397 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SSBP1Q04837 148 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 DNASE1L3Q13609 305 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ARFRP1Q13795 201 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ENDOGQ14249 297 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 ZNF630Q2M218 657 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 GTDC1Q4AE62 458 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NKAIN1Q4KMZ8 207 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FAM74A1Q5RGS3 127 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 WDR73Q6P4I2 378 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ANKRD16Q6P6B7 361 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TOMM20LQ6UXN7 152 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TIFABQ6ZNK6 161 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CATSPERGQ6ZRH7 1159 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 KCTD9Q7L273 389 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GALNTL5Q7Z4T8 443 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TAC4Q86UU9 113 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZSWIM9Q86XI8 627 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ADGRG2Q8IZP9 1017 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms