RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 BSGP35613 385 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 CCNG1P51959 295 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 CKAP4Q07065 602 aaKnown RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 TBL3Q12788 808 aaKnown RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 CUL3Q13618 768 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 PRAMEF20Q5VT98 475 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 B3GNT6Q6ZMB0 384 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 TAGAPQ8N103 731 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 PHF21BQ96EK2 531 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 LRRC1Q9BTT6 524 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 NOL11Q9H8H0 719 aaKnown RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 DDX31Q9H8H2 851 aaKnown RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 ZFP64Q9NPA5 681 aa14.19□□□□□ -0.14
TPM3-219ENST00000509409 BOKQ9UMX3 212 aaPredicted RBP14.19□□□□□ -0.14
TPM3-219ENST00000509409 A0A0A6YYD5 115 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 FOXE1O00358 373 aaPredicted RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 TMPRSS11DO60235 418 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 KLK8O60259 260 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 HCN1O60741 890 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 NADKO95544 446 aaPredicted RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 ZFP36L2P47974 494 aaKnown RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 HYAL4Q2M3T9 481 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 HLA-DQA1Q5Y7H0 255 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 MRM1Q6IN84 353 aaKnown RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 ZNF572Q7Z3I7 529 aaPredicted RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 CDH24Q86UP0 819 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 NUDT13Q86X67 352 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 DND1Q8IYX4 353 aaKnown RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 LIX1Q8N485 282 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 PTGR2Q8N8N7 351 aaPredicted RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 L3MBTL4Q8NA19 623 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 OR10G3Q8NGC4 313 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 PAQR8Q8TEZ7 354 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 UCN3Q969E3 161 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 GPR78Q96P69 363 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 CDK15Q96Q40 435 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 SERPINI1Q99574 410 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 TTYH2Q9BSA4 534 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 WWTR1Q9GZV5 400 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 PSD3Q9NYI0 1048 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 CNIH4Q9P003 139 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 MTRF1LQ9UGC7 380 aaKnown RBP14.18□□□□□ -0.14
TPM3-219ENST00000509409 IKBKGQ9Y6K9 419 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 AKAP9Q99996 3911 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 DCHS2Q6V1P9 2916 aa14.18□□□□□ -0.14
TPM3-219ENST00000509409 C2orf92A0A1B0GVN3 265 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 OR6C76A6NM76 312 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 CAPN14A8MX76 684 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 PGRMC2O15173 223 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 WDR1O75083 606 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 SMIM24O75264 130 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 LRATO95237 230 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 AIFM1O95831 613 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 INHBAP08476 426 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 RBP1P09455 135 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 FBXO45P0C2W1 286 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 SLC35E2P0CK97 266 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 GLI4P10075 376 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 PIK3R1P27986 724 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 SLC37A1P57057 533 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 IFT88Q13099 833 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 SGO1Q5FBB7 561 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 C6orf163Q5TEZ5 329 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 TMEM198Q66K66 360 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 METTL2BQ6P1Q9 378 aaKnown RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 LYPD8Q6UX82 237 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 DMRTC2Q8IXT2 367 aaPredicted RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 PLD6Q8N2A8 252 aaKnown RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 FBXW8Q8N3Y1 598 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 ACBD4Q8NC06 268 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 WDR20Q8TBZ3 569 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 TREX2Q9BQ50 279 aaPredicted RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 ZNF559Q9BR84 538 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 DOHHQ9BU89 302 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 ZNF717Q9BY31 904 aaPredicted RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 SH2D2AQ9NP31 389 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 NPDC1Q9NQX5 325 aaPredicted RBP14.17□□□□□ -0.14
TPM3-219ENST00000509409 ZDHHC18Q9NUE0 388 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 ZNF358Q9NW07 568 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 AHSPQ9NZD4 102 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 ADGRG4Q8IZF6 3080 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 PDZD2O15018 2839 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 OTOGQ6ZRI0 2925 aa14.17□□□□□ -0.14
TPM3-219ENST00000509409 OR7A17O14581 309 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 TP53I11O14683 189 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 URI1O94763 535 aaPredicted RBP14.16□□□□□ -0.14
TPM3-219ENST00000509409 ALDOAP04075 364 aaKnown RBP14.16□□□□□ -0.14
TPM3-219ENST00000509409 KLK1P06870 262 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 HOXD4P09016 255 aaPredicted RBP14.16□□□□□ -0.14
TPM3-219ENST00000509409 RFPL3SP0C7P2 107 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 GABRA1P14867 456 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 MSX1P28360 303 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 GALNSP34059 522 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 TRPC1P48995 793 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 TFF3Q07654 80 aa14.16□□□□□ -0.14
TPM3-219ENST00000509409 EBPQ15125 230 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms