RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 TEPPQ6URK8 271 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 GDF7Q7Z4P5 450 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 GALNTL5Q7Z4T8 443 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF595Q8IYB9 648 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 KLHDC8AQ8IYD2 350 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 GHDCQ8N2G8 530 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 ANKRD53Q8N9V6 530 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 B3GNT7Q8NFL0 401 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 OR2L5Q8NG80 312 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 ITLN2Q8WWU7 325 aaPredicted RBP6.93□□□□□ -1.3
CCSER1-208ENST00000509109 CCT6BQ92526 530 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 UBE2E3Q969T4 207 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 RHBDF1Q96CC6 855 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 VMP1Q96GC9 406 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 SIGLEC12Q96PQ1 595 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 KRT12Q99456 494 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 CPNE1Q99829 537 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 WDR83Q9BRX9 315 aaKnown RBP6.93□□□□□ -1.3
CCSER1-208ENST00000509109 EFCAB11Q9BUY7 163 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 DEFB126Q9BYW3 111 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 ROGDIQ9GZN7 287 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 SPNS1Q9H2V7 528 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 RHBGQ9H310 441 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 NT5DC2Q9H857 520 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 PLAC1Q9HBJ0 212 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 MOCS1Q9NZB8 636 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 SH3BGRL2Q9UJC5 107 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 PSAT1Q9Y617 370 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 CACNA1CQ13936 2221 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 PCNX1Q96RV3 2341 aa6.93□□□□□ -1.3
CCSER1-208ENST00000509109 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 TRBV11-1A0A0K0K1C0 115 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 LRIT2A6NDA9 550 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NCF1BA6NI72 391 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NCF1CA8MVU1 366 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NPIPA5E9PKD4 350 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 KLRC4-KLRK1H3BQV0 150 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 TFECO14948 347 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 MYO1DO94832 1006 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 GSTA2P09210 222 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CCDC166P0CW27 439 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SMIM10L1P0DMW3 83 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 COL6A2P12110 1019 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NCF1P14598 390 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 COX6B1P14854 86 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 HTR1EP28566 365 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SERPINB1P30740 379 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 GP5P40197 560 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 RPL21P46778 160 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 HLCSP50747 726 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 MTTPP55157 894 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 RAB38P57729 211 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 MLF1P58340 268 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 BTN3A2P78410 334 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CAV1Q03135 178 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 FASTKD3Q14CZ7 662 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 EFTUD2Q15029 972 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 ELAVL1Q15717 326 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 PDK4Q16654 411 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 HIST2H2ACQ16777 129 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 PRR31Q5SQ13 230 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 HIST2H2AA3Q6FI13 130 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SPINK14Q6IE38 97 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SULT1C3Q6IMI6 304 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 Q6ZPB1 254 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CCDC91Q7Z6B0 441 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 GPSM1Q86YR5 675 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 GPALPP1Q8IXQ4 340 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CYP4Z2PQ8N1L4 340 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CA13Q8N1Q1 262 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 TMEM132CQ8N3T6 1108 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 KIF2BQ8N4N8 673 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 TMEM156Q8N614 296 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SNX31Q8N9S9 440 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SRFBP1Q8NEF9 429 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CREB3L4Q8TEY5 395 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 DAZLQ92904 295 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 KIAA1191Q96A73 305 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 PTCD3Q96EY7 689 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SMIM10Q96HG1 83 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 PDLIM2Q96JY6 352 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 SERINC2Q96SA4 455 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 GPR22Q99680 433 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 RBBP8Q99708 897 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NPAS2Q99743 824 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CENPKQ9BS16 269 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 REXO4Q9GZR2 422 aaKnown RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 RAB17Q9H0T7 212 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CDCP1Q9H5V8 836 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 TRIM45Q9H8W5 580 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-208ENST00000509109 ADAP2Q9NPF8 381 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 PRTFDC1Q9NRG1 225 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 DNAJC11Q9NVH1 559 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NPIPA1Q9UND3 350 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 CLCA3PQ9Y6N3 262 aa6.92□□□□□ -1.3
CCSER1-208ENST00000509109 NCOA6Q14686 2063 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms