RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ADAMTS18Q8TE60 1221 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TSEN15Q8WW01 171 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM234Q8WY98 164 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 KAT2AQ92830 837 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC35C1Q96A29 364 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HSPBAP1Q96EW2 488 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PTCHD1Q96NR3 888 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MNTQ99583 582 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TXN2Q99757 166 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GABRG3Q99928 467 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 YIPF3Q9GZM5 350 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC6A16Q9GZN6 736 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TMBIM4Q9HC24 238 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MAGEE1Q9HCI5 957 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 EIF2B3Q9NR50 452 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHB16Q9NRJ7 776 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NXT1Q9UKK6 140 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NUP50Q9UKX7 468 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MRPS18BQ9Y676 258 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0J9YYE9 177 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SH3D21A4FU49 640 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DUXAA6NLW8 204 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 FTCDNL1E5RQL4 147 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SLC33A1O00400 549 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TRBC1P01850 177 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RLN1P04808 185 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NUDT7P0C024 238 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GP1BBP13224 206 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF3P17036 446 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 POU3F2P20265 443 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MYL9P24844 172 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PTPN4P29074 926 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 COILP38432 576 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GRIA3P42263 894 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ERVPABLB-1P60509 514 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RPL26P61254 145 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ATP6V0D1P61421 351 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 IL10RAQ13651 578 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HKDC1Q2TB90 917 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 TEX44Q53QW1 395 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF766Q5HY98 468 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF57Q68EA5 555 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PM20D1Q6GTS8 502 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 OGFOD2Q6N063 350 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 HMBOX1Q6NT76 420 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PRMT9Q6P2P2 845 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SUSD1Q6UWL2 747 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SPNS3Q6ZMD2 512 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RIPOR1Q6ZS17 1223 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 GPAT4Q86UL3 456 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MCATQ8IVS2 390 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 SPATA4Q8NEY3 305 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NANOS1Q8WY41 292 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 ATG4AQ8WYN0 398 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 NTAN1Q96AB6 310 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 P2RY11Q96G91 374 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DOCK7Q96N67 2140 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MKRN2Q9H000 416 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 MEAF6Q9HAF1 191 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 Q9N2J8 555 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 IKZF3Q9UKT9 509 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 RPL26L1Q9UNX3 145 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 R3HDM2Q9Y2K5 976 aaKnown RBP2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGA8Q9Y5G5 932 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 PCNX1Q96RV3 2341 aa2.82□□□□□ -1.96
NEDD4-208ENST00000508342 DOCK10Q96BY6 2186 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GUH1 482 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GMNCA6NCL1 334 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ADAM23O75077 832 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TPOP07202 933 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LTA4HP09960 611 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR12D1P0DN82 309 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 MTHFD2P13995 350 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CSRP1P21291 193 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF84P51523 738 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NXPH1P58417 271 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 IL18R1Q13478 541 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ADRM1Q16186 407 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NAIF1Q69YI7 327 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TXNDC11Q6PKC3 985 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 BNC2Q6ZN30 1099 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 DEF8Q6ZN54 512 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GPRIN3Q6ZVF9 776 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SATL1Q86VE3 508 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZDHHC13Q8IUH4 622 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 POC5Q8NA72 575 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR52E1Q8NGJ3 308 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NELL1Q92832 810 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KCNN1Q92952 543 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CLDN23Q96B33 292 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZBED6CLQ96FA7 236 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PIWIL1Q96J94 861 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TIMM29Q9BSF4 260 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 METTL8Q9H825 291 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NANOGQ9H9S0 305 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KCNJ16Q9NPI9 418 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NLE1Q9NVX2 485 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KCMF1Q9P0J7 381 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TRBV23-1A0A0A0MS06 115 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TLCD2A6NGC4 264 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms