RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SEC24CP53992 1094 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 GNGT1P63211 74 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 PLIN5Q00G26 463 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 AIMP2Q13155 320 aaKnown RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 EXT1Q16394 746 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 TBR1Q16650 682 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 SPRED3Q2MJR0 410 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 PDCD4Q53EL6 469 aaKnown RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 ANKRD26P1Q6NSI1 321 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 GPR155Q7Z3F1 870 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 CAMKMTQ7Z624 323 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 LRRC25Q8N386 305 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 KRTCAP2Q8N6L1 136 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 MORN4Q8NDC4 146 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 OR14A16Q8NHC5 309 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 M1APQ8TC57 530 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 NUDT8Q8WV74 236 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 APOBEC4Q8WW27 367 aaKnown RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 DAZLQ92904 295 aaKnown RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 PPCDCQ96CD2 204 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 TMEM120AQ9BXJ8 343 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 ATP13A2Q9NQ11 1180 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 SLAMF7Q9NQ25 335 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 SDR39U1Q9NRG7 319 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-210ENST00000506767 KLHL14Q9P2G3 628 aa11.99□□□□□ -0.49
TCOF1-210ENST00000506767 CROCCQ5TZA2 2017 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 A0A0G2JND7 137 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 GMNCA6NCL1 334 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 C17orf105B2RV13 164 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 E9PBE3 544 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 OR10H2O60403 315 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 KLHL41O60662 606 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CEACAM4O75871 244 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 IGKV3-11P04433 115 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 SERPINA7P05543 415 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CT62P0C5K7 136 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 LAMP1P11279 417 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 COX7A2P14406 83 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 TNNI3P19429 210 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 HPCAL1P37235 193 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 UFM1P61960 85 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-210ENST00000506767 MGAT2Q10469 447 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 MAP4K2Q12851 820 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CHAF1BQ13112 559 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 PRICKLE4Q2TBC4 344 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 METTL21CQ5VZV1 264 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 BORAQ6PGQ7 559 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 NATD1Q8N6N6 113 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CLEC1AQ8NC01 280 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 APCDD1LQ8NCL9 501 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 B3GNT7Q8NFL0 401 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 OR7A2PQ8NGA2 310 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF721Q8TF20 911 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 RIT1Q92963 219 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 TESCQ96BS2 214 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CTHRC1Q96CG8 243 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 MARK4Q96L34 752 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 TEX37Q96LM6 180 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 PRPF18Q99633 342 aaKnown RBP11.98□□□□□ -0.49
TCOF1-210ENST00000506767 DPY30Q9C005 99 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 SEMA4CQ9C0C4 833 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 GLIPR2Q9H4G4 154 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CLMPQ9H6B4 373 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CXorf21Q9HAI6 301 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 MMP25Q9NPA2 562 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 GIMAP4Q9NUV9 329 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 ZIM2Q9NZV7 527 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 SH3BP4Q9P0V3 963 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF639Q9UID6 485 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 ENTPD4Q9Y227 616 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 CLCA3PQ9Y6N3 262 aa11.98□□□□□ -0.49
TCOF1-210ENST00000506767 HRKO00198 91 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 PDPK1O15530 556 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 CLPSP04118 112 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 CELA2AP08217 269 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 DDX5P17844 614 aaKnown RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 S1PR1P21453 382 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 DRD4P21917 467 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 GPX3P22352 226 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 IL12AP29459 219 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 MPIP34949 423 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ZFP36L2P47974 494 aaKnown RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ATP4BP51164 291 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ARFIP2P53365 341 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 CLNS1AP54105 237 aaKnown RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 FUT7Q11130 342 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 MLC1Q15049 377 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 BTBD16Q32M84 506 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 LINC00303Q3SY05 128 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF628Q5EBL2 1059 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 H3F3CQ6NXT2 135 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 KBTBD2Q8IY47 623 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 GALNT16Q8N428 558 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 OR8J2Q8NGG1 315 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 OR1N1Q8NGS0 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms