RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RIT1Q92963 219 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 FRG2BQ96QU4 278 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 SERPINI1Q99574 410 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 CNPPD1Q9BV87 410 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 FARSBQ9NSD9 589 aaKnown RBP13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 PNPLA3Q9NST1 481 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 SACM1LQ9NTJ5 587 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 TEX10Q9NXF1 929 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF180Q9UJW8 692 aa13.28□□□□□ -0.28
CDC42SE2-209ENST00000506419 IQANK1A0A1B0GTG1 560 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 A0A1B0GVC2 190 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 P04436 131 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 CT62P0C5K7 136 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 RFPL3SP0C7P2 107 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 CTAGE8P0CG41 777 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 NR2F6P10588 404 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 GALNSP34059 522 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 PTGER4P35408 488 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 MAGEA5P43359 124 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 PHEXP78562 749 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 PLIN5Q00G26 463 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SPRED3Q2MJR0 410 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SGO1Q5FBB7 561 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 NDUFAF5Q5TEU4 345 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC22A10Q63ZE4 541 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 TMEM64Q6YI46 380 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 FAM47EQ6ZV65 393 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC22A16Q86VW1 577 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF441Q8N8Z8 693 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 PAQR8Q8TEZ7 354 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 MRPL57Q9BQC6 102 aaKnown RBP13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 MRPL1Q9BYD6 325 aaKnown RBP13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 UCK2Q9BZX2 261 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 WWTR1Q9GZV5 400 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 CXorf21Q9HAI6 301 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 TNFRSF10DQ9UBN6 386 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 RNF6Q9Y252 685 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF407Q9C0G0 2248 aa13.27□□□□□ -0.29
CDC42SE2-209ENST00000506419 ATP6AP2A0A1C7CYW4 349 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 DYRK3O43781 588 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 OR10H2O60403 315 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SMIM24O75264 130 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 ATP6AP2O75787 350 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 KRT38O76015 456 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SEMA3DO95025 777 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 RPS17P08708 135 aaKnown RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SNRPAP09012 282 aaKnown RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 FBXO45P0C2W1 286 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 S1PR1P21453 382 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SSTR4P31391 388 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SOX18P35713 384 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 HSD17B3P37058 310 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 PMPCAQ10713 525 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SLC10A1Q14973 349 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 EBPQ15125 230 aaKnown RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 LETMD1Q6P1Q0 360 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 PAOXQ6QHF9 649 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 RNF111Q6ZNA4 994 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TIFABQ6ZNK6 161 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 GK5Q6ZS86 529 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 NUDT13Q86X67 352 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 CCDC71Q8IV32 467 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 MMP21Q8N119 569 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 METTL4Q8N3J2 472 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 FAM109AQ8N4B1 249 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF615Q8N8J6 731 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 MNS1Q8NEH6 495 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 OR10G3Q8NGC4 313 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 LILRB4Q8NHJ6 448 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 ZNF483Q8TF39 744 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SPACA9Q96E40 222 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 ART5Q96L15 291 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 SPOCK3Q9BQ16 436 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 C1QTNF3Q9BXJ4 246 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 ENKD1Q9H0I2 346 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 MRPL46Q9H2W6 279 aaKnown RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TMEM216Q9P0N5 145 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 CNOT11Q9UKZ1 510 aaKnown RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 TMCO1Q9UM00 188 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 NFU1Q9UMS0 254 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 CHCHD2Q9Y6H1 151 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 IKBKGQ9Y6K9 419 aa13.26□□□□□ -0.29
CDC42SE2-209ENST00000506419 POLQO75417 2590 aa13.25□□□□□ -0.29
CDC42SE2-209ENST00000506419 A0A087WUV0 522 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE2-209ENST00000506419 ENO4A6NNW6 628 aa13.25□□□□□ -0.29
CDC42SE2-209ENST00000506419 A8MT66 165 aa13.25□□□□□ -0.29
CDC42SE2-209ENST00000506419 LRATO95237 230 aa13.25□□□□□ -0.29
CDC42SE2-209ENST00000506419 PDYNP01213 254 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms