RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SH2D2AQ9NP31 389 aa22.76■■□□□ 1.23
HERC4-212ENST00000505760 CPSF2Q9P2I0 782 aaKnown RBP22.76■■□□□ 1.23
HERC4-212ENST00000505760 ASB4Q9Y574 426 aa22.76■■□□□ 1.23
HERC4-212ENST00000505760 TNPO3Q9Y5L0 923 aaKnown RBP22.76■■□□□ 1.23
HERC4-212ENST00000505760 NCKAP5O14513 1909 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 A0A096LPK6 155 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 TRGV5A0A0B4J1U4 118 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 HCN1O60741 890 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 WDR1O75083 606 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 NADKO95544 446 aaPredicted RBP22.75■■□□□ 1.23
HERC4-212ENST00000505760 FAM58BPP0C7Q3 252 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 GLI4P10075 376 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 TYK2P29597 1187 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 BSGP35613 385 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 ARL1P40616 181 aaPredicted RBP22.75■■□□□ 1.23
HERC4-212ENST00000505760 PIK3CGP48736 1102 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 CUL3Q13618 768 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 PCBP2Q15366 365 aaKnown RBP eCLIP22.75■■□□□ 1.23
HERC4-212ENST00000505760 SPRED3Q2MJR0 410 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 GOLGA7Q7Z5G4 137 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 DMRTC2Q8IXT2 367 aaPredicted RBP22.75■■□□□ 1.23
HERC4-212ENST00000505760 ZNF717Q9BY31 904 aaPredicted RBP22.75■■□□□ 1.23
HERC4-212ENST00000505760 WWTR1Q9GZV5 400 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 DDX31Q9H8H2 851 aaKnown RBP22.75■■□□□ 1.23
HERC4-212ENST00000505760 ALKBH4Q9NXW9 302 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 CNIH4Q9P003 139 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 FAM215AQ9Y5M1 114 aa22.75■■□□□ 1.23
HERC4-212ENST00000505760 A0A0A6YYD5 115 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 A0A1W2PR48 441 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 ESYT3A0FGR9 886 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 HMX2A2RU54 273 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 TMPRSS11DO60235 418 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 KLK8O60259 260 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 SERPINB3P29508 390 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 ZFP36L2P47974 494 aaKnown RBP22.74■■□□□ 1.23
HERC4-212ENST00000505760 SERPINB8P50452 374 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 ETF1P62495 437 aaKnown RBP22.74■■□□□ 1.23
HERC4-212ENST00000505760 MRM1Q6IN84 353 aaKnown RBP22.74■■□□□ 1.23
HERC4-212ENST00000505760 ADGRD1Q6QNK2 874 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 LYPD8Q6UX82 237 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 SYT10Q6XYQ8 523 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 NUDT13Q86X67 352 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 FBXW8Q8N3Y1 598 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 OR10G3Q8NGC4 313 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 ZFP64Q9NPA5 681 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 RNF11Q9Y3C5 154 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 SPG11Q96JI7 2443 aa22.74■■□□□ 1.23
HERC4-212ENST00000505760 OR6C76A6NM76 312 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 WASHC1A8K0Z3 465 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 SIX3O95343 332 aaPredicted RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 HOXD4P09016 255 aaPredicted RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 FBXO45P0C2W1 286 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 PHBP35232 272 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 NEK2P51955 445 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 SLC37A1P57057 533 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 SLC7A5Q01650 507 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 RTL6Q6ICC9 239 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 CLYBLQ8N0X4 340 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 L3MBTL4Q8NA19 623 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 ATP6V1E2Q96A05 226 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 JSRP1Q96MG2 331 aaPredicted RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 ZNF559Q9BR84 538 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 VPS11Q9H270 941 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 ZNF703Q9H7S9 590 aaPredicted RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 RYDENQ9NUL5 291 aaKnown RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 PSD3Q9NYI0 1048 aa22.73■■□□□ 1.23
HERC4-212ENST00000505760 CHCHD2Q9Y6H1 151 aaPredicted RBP22.73■■□□□ 1.23
HERC4-212ENST00000505760 FREM3P0C091 2139 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 A0A0G2JNJ9 132 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 FOXE1O00358 373 aaPredicted RBP22.72■■□□□ 1.23
HERC4-212ENST00000505760 CLDN9O95484 217 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 AIFM1O95831 613 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 GBAP04062 536 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 RFPL3SP0C7P2 107 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 SLC35E2P0CK97 266 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 EBPQ15125 230 aaKnown RBP22.72■■□□□ 1.23
HERC4-212ENST00000505760 C1orf185Q5T7R7 199 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 OR52E8Q6IFG1 317 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 METTL2BQ6P1Q9 378 aaKnown RBP22.72■■□□□ 1.23
HERC4-212ENST00000505760 TAGAPQ8N103 731 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
HERC4-212ENST00000505760 WDR20Q8TBZ3 569 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 GPR78Q96P69 363 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 SLC24A3Q9HC58 644 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 SPRR3Q9UBC9 169 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 B4GALT7Q9UBV7 327 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 Q9UFV3 132 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 KCNN3Q9UGI6 736 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 ARHGAP21Q5T5U3 1957 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 MED13LQ71F56 2210 aa22.72■■□□□ 1.23
HERC4-212ENST00000505760 FAM47E-STBD1D6RA91 191 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 ALDOAP04075 364 aaKnown RBP22.71■■□□□ 1.23
HERC4-212ENST00000505760 GABRA1P14867 456 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 GALNSP34059 522 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 MYBPHQ13203 477 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 CES4AQ5XG92 561 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 ZNF572Q7Z3I7 529 aaPredicted RBP22.71■■□□□ 1.23
HERC4-212ENST00000505760 TMEM200AQ86VY9 491 aa22.71■■□□□ 1.23
HERC4-212ENST00000505760 LIX1Q8N485 282 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms