RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PTGER1P34995 402 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 HLCSP50747 726 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 CYP27C1Q4G0S4 372 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 RBM44Q6ZP01 1051 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 GALNT5Q7Z7M9 940 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 OOSP2Q86WS3 158 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 CADM4Q8NFZ8 388 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 NELL2Q99435 816 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 CDX2Q99626 313 aaPredicted RBP20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 THEGQ9P2T0 379 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 P2RX2Q9UBL9 471 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 PSME2Q9UL46 239 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 TESMINQ9Y4I5 508 aa20.13■□□□□ 0.81
UBE2D3-216ENST00000503742 CCDC88CQ9P219 2028 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 KNL1Q8NG31 2342 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 TNFRSF11BO00300 401 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 PDE9AO76083 593 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 NME1P15531 152 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 RYKP34925 604 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 PPP1CAP62136 330 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 RUNX2Q13950 521 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 PUM1Q14671 1186 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 DEFB134Q4QY38 66 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 BHLHB9Q6PI77 547 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF605Q86T29 641 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 IQCHQ86VS3 1027 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 SLC44A2Q8IWA5 706 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 GJD3Q8N144 294 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 OR5D16Q8NGK9 328 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 MIPOL1Q8TD10 442 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 FBLIM1Q8WUP2 373 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 HDAC2Q92769 488 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 SH3GLB1Q9Y371 365 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF780BQ9Y6R6 833 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 ENPP4Q9Y6X5 453 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 GON4LQ3T8J9 2241 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 B4DGG1 531 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 E9PQ18 207 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 BCKDKO14874 412 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 ZSCAN9O15535 394 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 UGT2B11O75310 529 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 FHP07954 510 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 BUD31P41223 144 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 KHKP50053 298 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 LIM2P55344 173 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 CD47Q08722 323 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 RBM48Q5RL73 367 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 MANEAQ5SRI9 462 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 ABHD13Q7L211 337 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 SZRD1Q7Z422 152 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 CHDHQ8NE62 594 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 GPR32P1Q8NGA4 272 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 OR56A1Q8NGH5 318 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 NCSTNQ92542 709 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 RERGQ96A58 199 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 PRDM9Q9NQV7 894 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 EXD2Q9NVH0 621 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 DDX18Q9NVP1 670 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 FBXL21Q9UKT6 434 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 POMT2Q9UKY4 750 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 DAPP1Q9UN19 280 aa20.12■□□□□ 0.81
UBE2D3-216ENST00000503742 B3GALT2O43825 422 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 ALOX12P18054 663 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 YAP1P46937 504 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 CLK3P49761 638 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 RPS6KA3P51812 740 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 KCNC4Q03721 635 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 KEAP1Q14145 624 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 SYPL1Q16563 259 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 CTU2Q2VPK5 515 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 TMEM107Q6UX40 140 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF438Q7Z4V0 828 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 ATG16L2Q8NAA4 619 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 OR9A2Q8NGT5 310 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 XAGE5Q8WWM1 108 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 ELP4Q96EB1 424 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 MAGED4Q96JG8 741 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 PIP5K1AQ99755 562 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 TREX2Q9BQ50 279 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 KRT84Q9NSB2 600 aa20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 MRPS2Q9Y399 296 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-216ENST00000503742 TMEM247A6NEH6 219 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 J3KTA2 159 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 EMC8O43402 210 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SLC28A2O43868 658 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 DNAJB6O75190 326 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 HMGN2P05204 90 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 RHCEP18577 417 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 CDH2P19022 906 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 CPN2P22792 545 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 CRHBPP24387 322 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 LIMS1P48059 325 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 HMGA2P52926 109 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TPD52P55327 224 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 RACK1P63244 317 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SPIBQ01892 262 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 MEP1AQ16819 746 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 C6orf141Q5SZD1 244 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 LAIR2Q6ISS4 152 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms