RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 LIN28AQ9H9Z2 209 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 MEAF6Q9HAF1 191 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 NMRAL1Q9HBL8 299 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 SNX15Q9NRS6 342 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PNPOQ9NVS9 261 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 DNAJB12Q9NXW2 375 aaKnown RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 PTTG3PQ9NZH4 202 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 COQ3Q9NZJ6 369 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MAGEL2Q9UJ55 1249 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 C3orf18Q9UK00 162 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 BAG5Q9UL15 447 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PDE10AQ9Y233 779 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 RPH3AQ9Y2J0 694 aaPredicted RBP4.9□□□□□ -1.63
HTT-202ENST00000502820 VWA7Q9Y334 891 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 TIMM22Q9Y584 194 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 PEX16Q9Y5Y5 336 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 MTORP42345 2549 aa4.9□□□□□ -1.63
HTT-202ENST00000502820 LRP4O75096 1905 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CCDC168Q8NDH2 2452 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 A0A087X1B8 175 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 LOC285095A0A1B0GVY8 99 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 HMX2A2RU54 273 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 NKX2-6A6NCS4 301 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CCDC154A6NI56 674 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 LILRA5A6NI73 299 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 OR5K4A6NMS3 321 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ZNF99A8MXY4 864 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 CXorf49A8MYA2 514 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 G3V2L1 256 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 J3QRK9 145 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 DLGAP1O14490 977 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SOCS2O14508 198 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PCDH17O14917 1159 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 UBDO15205 165 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ARHGEF9O43307 516 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 NRP2O60462 931 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 BCAS1O75363 584 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 LYPLA1O75608 230 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 CCNKO75909 580 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SLCO2B1O94956 709 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 LY6G6DO95868 133 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 MT-CYBP00156 380 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 SLC4A1P02730 911 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 APRTP07741 180 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 THRBP10828 461 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CDH1P12830 882 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ETS1P14921 441 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PRKCAP17252 672 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ITGA2P17301 1181 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 IL1RNP18510 177 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 TFEBP19484 476 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PRKACBP22694 351 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CRHBPP24387 322 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 EEF1B2P24534 225 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 CXCR2P25025 360 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RBL1P28749 1068 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CD68P34810 354 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 SLC19A1P41440 591 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CASP3P42574 277 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CAPZBP47756 277 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ST13P50502 369 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 CLCNKAP51800 687 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PLA2G16P53816 162 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RAD23AP54725 363 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 OLR1P78380 273 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 HSD11B2P80365 405 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 IFITM2Q01629 132 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 TEKQ02763 1124 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ABRQ12979 859 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 BMPR2Q13873 1038 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 DAG1Q14118 895 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FASTKQ14296 549 aaKnown RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 GK3PQ14409 553 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SSPNQ14714 243 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 POU6F1Q14863 301 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SF3B4Q15427 424 aaKnown RBP eCLIP4.89□□□□□ -1.63
HTT-202ENST00000502820 TIMM50Q3ZCQ8 353 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CDONQ4KMG0 1287 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SLC9B1Q4ZJI4 515 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 RSBN1Q5VWQ0 802 aaPredicted RBP4.89□□□□□ -1.63
HTT-202ENST00000502820 XAF1Q6GPH4 301 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FAM122CQ6P4D5 195 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PAOXQ6QHF9 649 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 KDELC1Q6UW63 502 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SHISA6Q6ZSJ9 500 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 ZCCHC23Q6ZST2 131 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 USP43Q70EL4 1123 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 PRSS42Q7Z5A4 293 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 P2RY8Q86VZ1 359 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 DDIASQ8IXT1 998 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 VWA5B2Q8N398 1253 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 FAM109AQ8N4B1 249 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 AVL9Q8NBF6 648 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SPATA22Q8NHS9 363 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 SUN3Q8TAQ9 357 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 DYNC2LI1Q8TCX1 351 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 STYXQ8WUJ0 223 aa4.89□□□□□ -1.63
HTT-202ENST00000502820 CYGBQ8WWM9 190 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms