RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 DCLK2Q8N568 766 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CNBD1Q8NA66 436 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 RAB7BQ96AH8 199 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF486Q96H40 463 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 DEFB118Q96PH6 123 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 FICDQ9BVA6 458 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 SYCP2Q9BX26 1530 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 RIBC2Q9H4K1 309 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 YAE1D1Q9NRH1 226 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CENPMQ9NSP4 180 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 AATFQ9NY61 560 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 ATXN10Q9UBB4 475 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 BCAP29Q9UHQ4 241 aa4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 GPATCH8Q9UKJ3 1502 aaKnown RBP4.59□□□□□ -1.67
HMGB1P3-201ENST00000502802 CLTCQ00610 1675 aaKnown RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 ADGBQ8N7X0 1667 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 INO80Q9ULG1 1556 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 A0A087WW49 117 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 SLCO1B7G3V0H7 640 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 LGALS8O00214 317 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZNF195O14628 629 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 KIAA0513O60268 411 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 VPS26AO75436 327 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TOM1L1O75674 476 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 KRT13P13646 458 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 GP9P14770 177 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 MYOGP15173 224 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 IL4RP24394 825 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TMOD1P28289 359 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 CCKARP32238 428 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 PRPHP41219 470 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 CDKL1Q00532 357 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 HNRNPDQ14103 355 aaKnown RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZNF528Q3MIS6 628 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 RFTN2Q52LD8 501 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 LIPKQ5VXJ0 399 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 ARHGAP17Q68EM7 881 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TRIM65Q6PJ69 517 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 PPP1R42Q7Z4L9 355 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 DENND6BQ8NEG7 585 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 OR5M9Q8NGP3 310 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 RPLP0P6Q8NHW5 317 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TCP11Q8WWU5 503 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TMEM37Q8WXS4 190 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 THRSPQ92748 146 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 MAGED4Q96JG8 741 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 UHRF2Q96PU4 802 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 RAB40CQ96S21 281 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TEX13BQ9BXU2 312 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 HOXD1Q9GZZ0 328 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 CXXC4Q9H2H0 198 aa4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 FAM124BQ9H5Z6 455 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.58□□□□□ -1.68
HMGB1P3-201ENST00000502802 TIAM1Q13009 1591 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 SCN5AQ14524 2016 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 CSO75390 466 aaKnown RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 IDH1O75874 414 aaKnown RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 APBB3O95704 486 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 RPLP0P05388 317 aaKnown RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 RRASP10301 218 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 CEBPBP17676 345 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 CHRNB4P30926 498 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 GPR183P32249 361 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 NPY2RP49146 381 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 OVGP1Q12889 678 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 CLPPQ16740 277 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 FAM76BQ5HYJ3 339 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 CWC27Q6UX04 472 aaKnown RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 Q6ZRG5 221 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 ITIH5Q86UX2 942 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 LCA5Q86VQ0 697 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 RBM18Q96H35 190 aaKnown RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 DCTN5Q9BTE1 182 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 NDUFAF3Q9BU61 184 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 TPPP3Q9BW30 176 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZNF416Q9BWM5 594 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 MTHFD2LQ9H903 347 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 C2orf42Q9NWW7 574 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 GTSE1Q9NYZ3 720 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 LNPEPQ9UIQ6 1025 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 LAMP5Q9UJQ1 280 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 MFHAS1Q9Y4C4 1052 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 ANGPTL3Q9Y5C1 460 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZHX2Q9Y6X8 837 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 PLXNC1O60486 1568 aa4.57□□□□□ -1.68
HMGB1P3-201ENST00000502802 ATP7AQ04656 1500 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 WDR81Q562E7 1941 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 ANKRD30BLA7E2S9 258 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 FAM72CH0Y354 149 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 PDXKO00764 312 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 LANCL1O43813 399 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 CEACAM4O75871 244 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 IGLV2-11P01706 119 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 KRT8P05787 483 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 CALCBP10092 127 aa4.56□□□□□ -1.68
HMGB1P3-201ENST00000502802 MBL2P11226 248 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms