RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PLD3Q8IV08 490 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 CCDC50Q8IVM0 306 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 RHOT2Q8IXI1 618 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 ULK2Q8IYT8 1036 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 TMEM251Q8N6I4 163 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 APCDD1LQ8NCL9 501 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 NFAM1Q8NET5 270 aaPredicted RBP6.98□□□□□ -1.29
VPS45-210ENST00000497638 OR13J1Q8NGT2 312 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 OR4L1Q8NH43 312 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 LINC01560Q8TB33 94 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 SLC35G2Q8TBE7 412 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 ZCCHC10Q8TBK6 192 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 IQCDQ96DY2 449 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 DACH2Q96NX9 599 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 GPHA2Q96T91 129 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 FAM173AQ9BQD7 235 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 LDAHQ9H6V9 325 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 EXO5Q9H790 373 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 C10orf88Q9H8K7 445 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 IL1RL2Q9HB29 575 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 FAM114A2Q9NRY5 505 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 HPF1Q9NWY4 346 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 ALKBH4Q9NXW9 302 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 FBXW2Q9UKT8 454 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 RIMKLBQ9ULI2 386 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 YARS2Q9Y2Z4 477 aaKnown RBP6.98□□□□□ -1.29
VPS45-210ENST00000497638 SLC22A7Q9Y694 548 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 DSCAMO60469 2012 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 ROS1P08922 2347 aa6.98□□□□□ -1.29
VPS45-210ENST00000497638 USF3Q68DE3 2245 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TRGV5A0A0B4J1U4 118 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 A0A0G2JMM0 328 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 A0A1W2PPB8 328 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 A0A1W2PRS3 328 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 ZNF860A6NHJ4 632 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 KIR3DP1A8MWS1 328 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SLC16A5O15375 505 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 DNAJB6O75190 326 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 MATN4O95460 622 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SLC35G6P0C7Q6 338 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 FPR1P21462 350 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TIMP3P35625 211 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TTPAP49638 278 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 PNLIPRP1P54315 467 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 ACVR1Q04771 509 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 DMTNQ08495 405 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TRIM14Q14142 442 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SLC10A1Q14973 349 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 HYAL4Q2M3T9 481 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TYSND1Q2T9J0 566 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 CCDC38Q502W7 563 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 CCDC181Q5TID7 509 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 HEPHL1Q6MZM0 1159 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 NIPAL1Q6NVV3 410 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SEM1Q6ZVN7 128 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 ZNF534Q76KX8 674 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 LRRC6Q86X45 466 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 LACC1Q8IV20 430 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 KATNAL2Q8IYT4 538 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 RCOR2Q8IZ40 523 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 NAXEQ8NCW5 288 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 B3GNT7Q8NFL0 401 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 OR5AN1Q8NGI8 311 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 ACTL9Q8TC94 416 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 PERPQ96FX8 193 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 VMP1Q96GC9 406 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 CCDC77Q9BR77 488 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 CNPPD1Q9BV87 410 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 TMEM184CQ9NVA4 438 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 ANAPC5Q9UJX4 755 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 PPIEQ9UNP9 301 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 EIF3LQ9Y262 564 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 DRG1Q9Y295 367 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 R3HDM2Q9Y2K5 976 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 NAALAD2Q9Y3Q0 740 aa6.97□□□□□ -1.29
VPS45-210ENST00000497638 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.97□□□□□ -1.29
VPS45-210ENST00000497638 IGKV3D-11A0A0A0MRZ8 115 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 ATP6AP2A0A1C7CYW4 349 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 MACROD2A1Z1Q3 448 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 MBD3L4A6NDZ8 208 aaPredicted RBP6.96□□□□□ -1.3
VPS45-210ENST00000497638 MBD3L5A6NJ08 208 aaPredicted RBP6.96□□□□□ -1.3
VPS45-210ENST00000497638 E7ENX8 843 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 PSMD3O43242 534 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 B4GALT2O60909 372 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 PSIP1O75475 530 aaKnown RBP6.96□□□□□ -1.3
VPS45-210ENST00000497638 ATP6AP2O75787 350 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 SLC16A8O95907 504 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 EPPINO95925 133 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 GAS8O95995 478 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 CATP04040 527 aaKnown RBP6.96□□□□□ -1.3
VPS45-210ENST00000497638 RBP3P10745 1247 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 CNR1P21554 472 aa6.96□□□□□ -1.3
VPS45-210ENST00000497638 RPS3P23396 243 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS45-210ENST00000497638 EIF3EP60228 445 aaKnown RBP6.96□□□□□ -1.3
VPS45-210ENST00000497638 PRAMEP78395 509 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms