RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MRGPREQ86SM8 312 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PNLDC1Q8NA58 520 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TSEN15Q8WW01 171 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 IGFBPL1Q8WX77 278 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PIGCQ92535 297 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 LPAR1Q92633 364 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ITFG2Q969R8 447 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 HAVCR1Q96D42 359 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PANX1Q96RD7 426 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 S1PR3Q99500 378 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 OMDQ99983 421 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 SH2D3AQ9BRG2 576 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 UBAC1Q9BSL1 405 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CYP3A43Q9HB55 503 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 RAB18Q9NP72 206 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 SLC52A3Q9NQ40 469 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 KLHL28Q9NXS3 571 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 FOXJ2Q9P0K8 574 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PILRAQ9UKJ1 303 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PIGLQ9Y2B2 252 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 GMEB1Q9Y692 573 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ZHX2Q9Y6X8 837 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TRPM1Q7Z4N2 1603 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 JCADQ9P266 1359 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CENPJQ9HC77 1338 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 KIAA1210Q9ULL0 1709 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 A0A0G2JK05 382 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TEX13DA0A0J9YY54 714 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TARM1B6A8C7 271 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SMIM22K7EJ46 135 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ABCD4O14678 606 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 YKT6O15498 198 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 BUD23O43709 281 aaKnown RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 DFNA5O60443 496 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 FHP07954 510 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TROVE2P10155 538 aaKnown RBP eCLIP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 EZRP15311 586 aaKnown RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 NT5EP21589 574 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 MPLP40238 635 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 PDX1P52945 283 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CRYBB1P53674 252 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CDH4P55283 916 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SELENOVP59797 346 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ENPP2Q13822 863 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ODF4Q2M2E3 257 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 AMZ1Q400G9 498 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 LINC01620Q4KN68 170 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CTSL3PQ5NE16 218 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TCERG1LQ5VWI1 586 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SNRNP48Q6IEG0 339 aaKnown RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CEACAM20Q6UY09 585 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 MUC20Q8N307 709 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 INPP4AQ96PE3 977 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 CCDC3Q9BQI4 270 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 PANK2Q9BZ23 570 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TRIM9Q9C026 710 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SLC26A1Q9H2B4 701 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 LRMDAQ9H2I8 198 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 FAM124BQ9H5Z6 455 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM185BQ9H7F4 350 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF703Q9H7S9 590 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 RNF121Q9H920 327 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 LZTFL1Q9NQ48 299 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM45AQ9NWC5 275 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SPHK1Q9NYA1 384 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ERVK-18Q9QC07 812 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 PISDQ9UG56 409 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 MRTO4Q9UKD2 239 aaKnown RBP5.55□□□□□ -1.52
BRCA1-224ENST00000497488 ETV7Q9Y603 341 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 PXDNQ92626 1479 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 SHPRHQ149N8 1683 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 PNPLA6Q8IY17 1366 aa5.55□□□□□ -1.52
BRCA1-224ENST00000497488 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 UPK3AO75631 287 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 YEATS4O95619 227 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 ANXA4P09525 319 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 HKR1P10072 659 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 CHRNB1P11230 501 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 UCP1P25874 307 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 U2AF2P26368 475 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■■■□□ 19.1
BRCA1-224ENST00000497488 ALDH1B1P30837 517 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 CYLC1P35663 651 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 ALDH3B1P43353 468 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 NPY2RP49146 381 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 LIMK2P53671 638 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 CLDN17P56750 224 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 RPS15P62841 145 aaKnown RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 DRP2Q13474 957 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM44Q2T9K0 475 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 HIKESHIQ53FT3 197 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 AGBL2Q5U5Z8 902 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF776Q68DI1 518 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 WASH2PQ6VEQ5 465 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 GOLGA7Q7Z5G4 137 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 VPS36Q86VN1 386 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms