RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	TPT1P8	Q9HAU6	139 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FLRT1	Q9NZU1	646 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	VAPA	Q9P0L0	249 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF70	Q9UC06	446 aa	Predicted RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PPP2R3B	Q9Y5P8	575 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZFC3H1	O60293	1989 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C17orf113	A0A1B0GUU1	675 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	URAD	A6NGE7	173 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC9B1P1	A6NJY1	282 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WASH3P	C4AMC7	463 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ENDOD1	O94919	500 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	VIPR1	P32241	457 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KCNJ10	P78508	379 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PPIG	Q13427	754 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IRF3	Q14653	427 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MPEG1	Q2M385	716 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PTCHD3	Q3KNS1	767 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GLYR1	Q49A26	553 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM74A1	Q5RGS3	127 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	B3GNTL1	Q67FW5	361 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM111B	Q6SJ93	734 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF730	Q6ZMV8	503 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CMIP	Q8IY22	773 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NAGS	Q8N159	534 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PHOSPHO1	Q8TCT1	267 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMAP2	Q8WU79	429 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM174	Q8WUU8	243 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HPDL	Q96IR7	371 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HBEGF	Q99075	208 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PITX2	Q99697	317 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TFB2M	Q9H5Q4	396 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WDR26	Q9H7D7	661 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TLR9	Q9NR96	1032 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PCDHGA6	Q9Y5G7	932 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549		F5H5P2	479 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DPYSL4	O14531	572 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CA12	O43570	354 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SC5D	O75845	299 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BCKDHA	P12694	445 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SELL	P14151	372 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SPI1	P17947	270 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KDELR2	P33947	212 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SCN4A	P35499	1836 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OMP	P47874	163 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RGS4	P49798	205 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RHEB	Q15382	184 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RSU1	Q15404	277 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ERFE	Q4G0M1	354 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SPANXN4	Q5MJ08	99 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LYPD4	Q6UWN0	246 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BAIAP2L2	Q6UXY1	529 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MSANTD1	Q6ZTZ1	278 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CEP68	Q76N32	757 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CBLN2	Q8IUK8	224 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PYROXD2	Q8N2H3	581 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DCBLD1	Q8N8Z6	715 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACVR1C	Q8NER5	493 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DBF4B	Q8NFT6	615 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CPNE2	Q96FN4	548 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BSCL2	Q96G97	398 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PIWIL1	Q96J94	861 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPYC	Q99645	322 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ESRP2	Q9H6T0	727 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PLAC1	Q9HBJ0	212 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LRTM1	Q9HBL6	345 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATP13A1	Q9HD20	1204 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GPR160	Q9UJ42	338 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WASF3	Q9UPY6	502 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AKAP11	Q9UKA4	1901 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IGLV3-22	A0A075B6J6	115 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SEC14L5	O43304	696 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MPC2	O95563	127 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POP4	O95707	220 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CST3	P01034	146 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NQO2	P16083	231 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GNAL	P38405	381 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KIR3DL1	P43629	444 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RAB8A	P61006	207 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	UBE2I	P63279	158 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CRHR2	Q13324	411 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SPDYE2	Q495Y8	402 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM69A	Q5T7M9	428 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM107	Q6UX40	140 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANKRD46	Q86W74	232 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TERB2	Q8NHR7	220 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SKA2	Q8WVK7	121 aa	Predicted RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GTF3A	Q92664	365 aa	Known RBP	7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLAMF9	Q96A28	289 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SCMH1	Q96GD3	660 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PIGQ	Q9BRB3	760 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RGCC	Q9H4X1	137 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FAM50B	Q9Y247	325 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PCDHB7	Q9Y5E2	793 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PCDHGA2	Q9Y5H1	932 aa		7.82	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DDX60	Q8IY21	1712 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TNS2	Q63HR2	1409 aa		7.81	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms