RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 SLA2Q9H6Q3 261 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 IFNA21P01568 189 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 C15orf39Q6ZRI6 1047 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 HAPLN2Q9GZV7 340 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 PROM1O43490 865 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 MT-ND5P03915 603 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 SLC2A2P11168 524 aaPredicted RBP12.57□□□□□ -0.4
PTPRF-215ENST00000496447 IL1RNP18510 177 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 PRKACGP22612 351 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 GLP1RP43220 463 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 MLLT10P55197 1068 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 SHC2P98077 582 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 ERMP1Q7Z2K6 904 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 DOK4Q8TEW6 326 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 DIO2Q92813 273 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 LPAR4Q99677 370 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 TTTY10Q9BZA0 68 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 TMEM184CQ9NVA4 438 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 PRAMEF26H0Y7S4 382 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 SOX30O94993 753 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 ARSFP54793 590 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 FADDQ13158 208 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 TCEANCQ8N8B7 351 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 TMEM41AQ96HV5 264 aa12.57□□□□□ -0.4
PTPRF-215ENST00000496447 FGF3P11487 239 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 NPR2P20594 1047 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 PXNP49023 591 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GPR143P51810 404 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 RHDQ02161 417 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ACY1Q03154 408 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 LRP8Q14114 963 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 USF2Q15853 346 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GALNT10Q86SR1 603 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 PLCZ1Q86YW0 608 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 OR4N5Q8IXE1 308 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 HUS1BQ8NHY5 278 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 METTL8Q9H825 291 aaKnown RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GPRC5BQ9NZH0 403 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 SEC14L5O43304 696 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 BCKDHAP12694 445 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 FDXRP22570 491 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 CXCL12P48061 93 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 LYSMD4Q5XG99 296 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ASB18Q6ZVZ8 466 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 CEP76Q8TAP6 659 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 SHKBP1Q8TBC3 707 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 MTG2Q9H4K7 406 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 CPNE5Q9HCH3 593 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GPR89AB7ZAQ6 455 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 RTCAO00442 366 aaKnown RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 HTRA2O43464 458 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-215ENST00000496447 PPM1BO75688 479 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 H2BFMP0C1H6 154 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GPR89BP0CG08 455 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ADORA3P0DMS8 318 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 S1PR1P21453 382 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 DEFB110Q30KQ9 67 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 KIAA1614Q5VZ46 1190 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 NPWQ8N729 165 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 OR52P1PQ8NH57 321 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ASB15Q8WXK1 588 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 THRSPQ92748 146 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 UNC119BA6NIH7 251 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 GPR37L1O60883 481 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 RFPL1O75677 317 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 AK1P00568 194 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ABRAXAS2Q15018 415 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 UNC50Q53HI1 259 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ATG9BQ674R7 924 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 HSPA12BQ96MM6 686 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 UBQLN2Q9UHD9 624 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
PTPRF-215ENST00000496447 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-215ENST00000496447 STOMP27105 288 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 C1orf220Q5T0J3 134 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 PLEKHG7Q6ZR37 379 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 Q6ZSR6 202 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 ZSWIM9Q86XI8 627 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 KLHDC8AQ8IYD2 350 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 GATA6Q92908 595 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 AURKBQ96GD4 344 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-215ENST00000496447 TRPV4Q9HBA0 871 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 EDARQ9UNE0 448 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
PTPRF-215ENST00000496447 ARSDP51689 593 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 SIM1P81133 766 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-215ENST00000496447 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-215ENST00000496447 KIF18BQ86Y91 864 aa12.55□□□□□ -0.4
PTPRF-215ENST00000496447 GID4Q8IVV7 300 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms