RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ARL1P40616 181 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SLC37A1P57057 533 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 FOXO1Q12778 655 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 BIKQ13323 160 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 FRG2Q64ET8 278 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 OPN5Q6U736 354 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 FAM47EQ6ZV65 393 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 TMEM251Q8N6I4 163 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 OR4F6Q8NGB9 312 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF483Q8TF39 744 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ATP6V1E2Q96A05 226 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ART5Q96L15 291 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SGCZQ96LD1 299 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 FRG2BQ96QU4 278 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 MRPL57Q9BQC6 102 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 MRPL1Q9BYD6 325 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 TRIM8Q9BZR9 551 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 WWTR1Q9GZV5 400 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 MRPL46Q9H2W6 279 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 TUBA8Q9NY65 449 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 IKBKGQ9Y6K9 419 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 A0A087WUV0 522 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-209ENST00000496445 PGRMC2O15173 223 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 OR10H2O60403 315 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 IGHG3P01860 377 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 CELA3AP09093 270 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 COX6B1P14854 86 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 CNR1P21554 472 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 PTGER4P35408 488 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 MAGEA5P43359 124 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 KIR3DL1P43629 444 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF267Q14586 743 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-209ENST00000496445 NDUFAF5Q5TEU4 345 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 OR52E8Q6IFG1 317 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 LETMD1Q6P1Q0 360 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 RNF111Q6ZNA4 994 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 RGS9BPQ6ZS82 235 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 SLC22A16Q86VW1 577 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF441Q8N8Z8 693 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 SLC22A8Q8TCC7 542 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 RIT1Q92963 219 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 GAL3ST4Q96RP7 486 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 PELOQ9BRX2 385 aaKnown RBP13.17□□□□□ -0.3
VTI1A-209ENST00000496445 C1QTNF3Q9BXJ4 246 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 IL1RL2Q9HB29 575 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 FARSBQ9NSD9 589 aaKnown RBP13.17□□□□□ -0.3
VTI1A-209ENST00000496445 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
VTI1A-209ENST00000496445 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 DYRK3O43781 588 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 P04436 131 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 KLK1P06870 262 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 ABHD2P08910 425 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 FBXO45P0C2W1 286 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 CT62P0C5K7 136 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 SLC35E2P0CK97 266 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 TSPAN8P19075 237 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 GALNSP34059 522 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 PIGAP37287 484 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 HYAL4Q2M3T9 481 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 PRAMEF20Q5VT98 475 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 MILR1Q7Z6M3 343 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF295-AS1Q8N0V1 137 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 EID3Q8N140 333 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 FAM109AQ8N4B1 249 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 ACBD4Q8NC06 268 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 OR10G3Q8NGC4 313 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 PAQR8Q8TEZ7 354 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 SDCCAG3Q96C92 435 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-209ENST00000496445 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 CXorf21Q9HAI6 301 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 PROK2Q9HC23 129 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 PNPLA3Q9NST1 481 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.16□□□□□ -0.39e-7■■■■□ 22.5
VTI1A-209ENST00000496445 ADAM29Q9UKF5 820 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 CHCHD2Q9Y6H1 151 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-209ENST00000496445 ARHGAP21Q5T5U3 1957 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 NINQ8N4C6 2090 aa13.16□□□□□ -0.3
VTI1A-209ENST00000496445 VPS13CQ709C8 3753 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 A0A1B0GVC2 190 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 NPIPA2E9PIF3 369 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 NPIPA3F8WFD2 350 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 LRATO95237 230 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 PDYNP01213 254 aa13.15□□□□□ -0.3
VTI1A-209ENST00000496445 SNRPAP09012 282 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms