RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 MEAF6Q9HAF1 191 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PFDN4Q9NQP4 134 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PSME2Q9UL46 239 aa18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PPIEQ9UNP9 301 aaKnown RBP18.11■□□□□ 0.49
HDAC4-212ENST00000495497 PIEZO2Q9H5I5 2752 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 TNRC6AQ8NDV7 1962 aaKnown RBP18.1■□□□□ 0.49
HDAC4-212ENST00000495497 F10P00742 488 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 CLCN2P51788 898 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 AP2B1P63010 937 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ERVK-8P63133 956 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 NFATC3Q12968 1075 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 CRB2Q5IJ48 1285 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 H3F3CQ6NXT2 135 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ISLR2Q6UXK2 745 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 MAVSQ7Z434 540 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 KIRREL3Q8IZU9 778 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 OR1N1Q8NGS0 311 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF721Q8TF20 911 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 NUDT8Q8WV74 236 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 VMP1Q96GC9 406 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 SENP5Q96HI0 755 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF681Q96N22 645 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 CNPPD1Q9BV87 410 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 CDCP1Q9H5V8 836 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 WDR55Q9H6Y2 383 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-212ENST00000495497 LIN28AQ9H9Z2 209 aaKnown RBP18.1■□□□□ 0.49
HDAC4-212ENST00000495497 PLA2G3Q9NZ20 509 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ERVK-19Q9WJR5 959 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 ZNF780BQ9Y6R6 833 aa18.1■□□□□ 0.49
HDAC4-212ENST00000495497 GOLGA8QA0A0J9YX86 632 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 GOLGA8OA6NCC3 632 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 GOLGA8NF8WBI6 632 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 SDHDO14521 159 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 HDAC3O15379 428 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 ALPPP05187 535 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 CSNK2A2P19784 350 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-212ENST00000495497 NT5EP21589 574 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 MAPK1P28482 360 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 LTB4RQ15722 352 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 FAM47EQ6ZV65 393 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 CCDC116Q8IYX3 515 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 C7orf57Q8NEG2 295 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 ADCY4Q8NFM4 1077 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 PIWIL2Q8TC59 973 aaKnown RBP18.09■□□□□ 0.49
HDAC4-212ENST00000495497 MAGEB18Q96M61 343 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 PELOQ9BRX2 385 aaKnown RBP18.09■□□□□ 0.49
HDAC4-212ENST00000495497 DEFB126Q9BYW3 111 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 CXorf21Q9HAI6 301 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 MED4Q9NPJ6 270 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 MIEF1Q9NQG6 463 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 SLC35C2Q9NQQ7 365 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 STMN3Q9NZ72 180 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 PCDHGB7Q9Y5F8 929 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 CSAG2Q9Y5P2 127 aa18.09■□□□□ 0.49
HDAC4-212ENST00000495497 KLHL41O60662 606 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 CLPSP04118 112 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 EPHA3P29320 983 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 SSTR4P31391 388 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 EMX2Q04743 252 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 MFAP5Q13361 173 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 PTGR1Q14914 329 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 SPRED3Q2MJR0 410 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 NADK2Q4G0N4 442 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 SLC9B1Q4ZJI4 515 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 ACER2Q5QJU3 275 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 FAM111BQ6SJ93 734 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 IGFL2Q6UWQ7 119 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 C16orf47Q6ZP98 133 aaPredicted RBP18.08■□□□□ 0.48
HDAC4-212ENST00000495497 IKBIPQ70UQ0 350 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 GALNT12Q8IXK2 581 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 LRRC25Q8N386 305 aaPredicted RBP18.08■□□□□ 0.48
HDAC4-212ENST00000495497 RBMXL3Q8N7X1 1067 aaKnown RBP18.08■□□□□ 0.48
HDAC4-212ENST00000495497 C7orf26Q96N11 449 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 BRINP2Q9C0B6 783 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 EHD3Q9NZN3 535 aa18.08■□□□□ 0.48
HDAC4-212ENST00000495497 WBP11Q9Y2W2 641 aaKnown RBP18.08■□□□□ 0.48
HDAC4-212ENST00000495497 DOCK10Q96BY6 2186 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 ATRXP46100 2492 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 TMEM200CA6NKL6 621 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 EIF4E1BA6NMX2 242 aaKnown RBP18.07■□□□□ 0.48
HDAC4-212ENST00000495497 ZNF195O14628 629 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 DYRK3O43781 588 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 C1QL1O75973 258 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 WDPCPO95876 746 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 IGKV3-11P04433 115 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 G6PDP11413 515 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 PRPS2P11908 318 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 GALNSP34059 522 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 SOX18P35713 384 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 DIO3P55073 304 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 MGAT2Q10469 447 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 ZNF385BQ569K4 471 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 ABHD17BQ5VST6 288 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 LARP4Q71RC2 724 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC4-212ENST00000495497 RPS19BP1Q86WX3 136 aaKnown RBP18.07■□□□□ 0.48
HDAC4-212ENST00000495497 BEST3Q8N1M1 668 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 SLC5A8Q8N695 610 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 SIMC1Q8NDZ2 872 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 CATSPER1Q8NEC5 780 aa18.07■□□□□ 0.48
HDAC4-212ENST00000495497 FBXL20Q96IG2 436 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms