RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 MFAP5Q13361 173 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF267Q14586 743 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 C6orf136Q5SQH8 315 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 FAM71E1Q6IPT2 247 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 HSDL2Q6YN16 418 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 PTRH1Q86Y79 214 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 LRRC25Q8N386 305 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 KIF2BQ8N4N8 673 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC2A12Q8TD20 617 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 SENP5Q96HI0 755 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 TSSK3Q96PN8 268 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 BBS4Q96RK4 519 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 CNPPD1Q9BV87 410 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 CDCP1Q9H5V8 836 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 HEY2Q9UBP5 337 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 HEMK1Q9Y5R4 338 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 CACNA1GO43497 2377 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 KALRNO60229 2985 aa11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-213ENST00000495232 CROCCQ5TZA2 2017 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 FCHO1O14526 889 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 PDGFAP04085 211 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 BCKDHAP12694 445 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SDC1P18827 310 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 NTSP30990 170 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 MPIP34949 423 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 HPCAL1P37235 193 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 RPL3P39023 403 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 CASRP41180 1078 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 ERVK-8P63133 956 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 OCRLQ01968 901 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SPRED3Q2MJR0 410 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SMU1Q2TAY7 513 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 ACER2Q5QJU3 275 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 B3GNTL1Q67FW5 361 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 FCRLBQ6BAA4 426 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 H3F3CQ6NXT2 135 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 FAM180BQ6P0A1 224 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 IGFL3Q6UXB1 125 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 R3HCC1LQ7Z5L2 792 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 RPS19BP1Q86WX3 136 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 TICAM1Q8IUC6 712 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 WDR75Q8IWA0 830 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 GALNT12Q8IXK2 581 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 LIX1Q8N485 282 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 APCDD1LQ8NCL9 501 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 OR5L2Q8NGL0 311 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SUN3Q8TAQ9 357 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 PIWIL2Q8TC59 973 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 PSMF1Q92530 271 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 FBXL20Q96IG2 436 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 FCRL1Q96LA6 429 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 MAGEB18Q96M61 343 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 C1orf50Q9BV19 199 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 BRINP2Q9C0B6 783 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 AKTIPQ9H8T0 292 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 MEAF6Q9HAF1 191 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC35C2Q9NQQ7 365 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 NOP53Q9NZM5 478 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 GIMAP2Q9UG22 337 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 BAIAP2L1Q9UHR4 511 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 PPIEQ9UNP9 301 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 ERVK-19Q9WJR5 959 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
CSNK1E-213ENST00000495232 SMG1Q96Q15 3661 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 AKAP10O43572 662 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 LRATO95237 230 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 DDAH2O95865 285 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 ATP1B1P05026 303 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 JUNP05412 331 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 TACR1P25103 407 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 SOX11P35716 441 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 EMX2Q04743 252 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF750Q32MQ0 723 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 IL23RQ5VWK5 629 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 NXNQ6DKJ4 435 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 RNF111Q6ZNA4 994 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 DGAT2L6Q6ZPD8 337 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 FAM9CQ8IZT9 166 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 LGI4Q8N135 537 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 AMER2Q8N7J2 671 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CLHC1Q8NHS4 586 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 ZNF721Q8TF20 911 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 PPCDCQ96CD2 204 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CNRIP1Q96F85 164 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 EGLN2Q96KS0 407 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 C7orf26Q96N11 449 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 PRPF18Q99633 342 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 UTP23Q9BRU9 249 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 REEP4Q9H6H4 257 aa11.25□□□□□ -0.61
CSNK1E-213ENST00000495232 CXorf21Q9HAI6 301 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms