RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DDX31Q9H8H2 851 aaKnown RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 WDR41Q9HAD4 459 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 FARSBQ9NSD9 589 aaKnown RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 SACM1LQ9NTJ5 587 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 LYARQ9NX58 379 aaKnown RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 TUBA8Q9NY65 449 aaPredicted RBP8.87□□□□□ -0.99
MSH5-218ENST00000494646 PSD3Q9NYI0 1048 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 TNFRSF10DQ9UBN6 386 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 PCTPQ9UKL6 214 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 NFU1Q9UMS0 254 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 TSC22D4Q9Y3Q8 395 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 LIPGQ9Y5X9 500 aa8.87□□□□□ -0.99
MSH5-218ENST00000494646 ARHGAP21Q5T5U3 1957 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 INTS1Q8N201 2190 aaKnown RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 ATP6AP2A0A1C7CYW4 349 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 STX16-NPEPL1H3BU86 382 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ACOT7O00154 380 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 STX16O14662 325 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ATP6AP2O75787 350 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 LRATO95237 230 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 AIFM1O95831 613 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PDYNP01213 254 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SNRPAP09012 282 aaKnown RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 CELA3AP09093 270 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SBK3P0C264 359 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 NR2F6P10588 404 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 COL6A2P12110 1019 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 VAMP1P23763 118 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PIK3R1P27986 724 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ARFIP1P53367 373 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PLIN5Q00G26 463 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PMPCAQ10713 525 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 IFT88Q13099 833 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 MPEG1Q2M385 716 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TSNAXIP1Q2TAA8 658 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 EMC4Q5J8M3 183 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 CCNYL2Q5T2Q4 361 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PRAMEF20Q5VT98 475 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SLC22A10Q63ZE4 541 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 FRG2Q64ET8 278 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ZNF585AQ6P3V2 769 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ARHGAP11AQ6P4F7 1023 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TMEM64Q6YI46 380 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 RNF111Q6ZNA4 994 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TAOK1Q7L7X3 1001 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SLC29A4Q7RTT9 530 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SLC22A16Q86VW1 577 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 NUDT13Q86X67 352 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TMEM151AQ8N4L1 468 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TMEM251Q8N6I4 163 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 C7orf57Q8NEG2 295 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 OR5M3Q8NGP4 307 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TRPC4APQ8TEL6 797 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 ISL2Q96A47 359 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 FBXL20Q96IG2 436 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SGCZQ96LD1 299 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 FRG2BQ96QU4 278 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 GAL3ST4Q96RP7 486 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 MRPL57Q9BQC6 102 aaKnown RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 FAM173AQ9BQD7 235 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 UCK2Q9BZX2 261 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 MRPL46Q9H2W6 279 aaKnown RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 PNPLA3Q9NST1 481 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 TEX10Q9NXF1 929 aaPredicted RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 ALKBH4Q9NXW9 302 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 AHSPQ9NZD4 102 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 COQ3Q9NZJ6 369 aa8.86□□□□□ -0.99
MSH5-218ENST00000494646 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.86□□□□□ -0.99
MSH5-218ENST00000494646 C2orf92A0A1B0GVN3 265 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 EXOC1LA0A1B0GW35 172 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 A8MT66 165 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 GOLGA8RI6L899 631 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SUPT7LO94864 414 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 GLSO94925 669 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 OR4F21O95013 312 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 NADKO95544 446 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 CLPSP04118 112 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 CT62P0C5K7 136 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 FAM153BP0C7A2 387 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 RHOXF2BP0C7M4 288 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 RFPL3SP0C7P2 107 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SLC35E2P0CK97 266 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 AGAP20933 346 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 NT5EP21589 574 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 CNTFP26441 200 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 GCAP28676 217 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TNFRSF8P28908 595 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SSTR4P31391 388 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 HSD17B3P37058 310 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 XKP51811 444 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SLC37A1P57057 533 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TRAF3Q13114 568 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SLC10A1Q14973 349 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 ZNF791Q3KP31 576 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 FAM153CQ494X1 144 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TCHHL1Q5QJ38 904 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 LGSNQ5TDP6 509 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TMEM211Q6ICI0 200 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 FAM180BQ6P0A1 224 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms