RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 DYRK3O43781 588 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 HCN1O60741 890 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 EEDO75530 441 aaKnown RBP11.62□□□□□ -0.55
SKA1-205ENST00000494518 CTAG2O75638 210 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 C1QAP02745 245 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 GBAP04062 536 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 SLC35E2BP0CK96 405 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 CD99P14209 185 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 BMP5P22003 454 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 GDF1P27539 372 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 CASP2P42575 452 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 PAFAH1B1P43034 410 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 KIR2DL3P43628 341 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 PIK3CGP48736 1102 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 GPX6P59796 221 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 IRF9Q00978 393 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 SLC25A35Q3KQZ1 300 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 KBTBD12Q3ZCT8 623 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 RIPPLY2Q5TAB7 128 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 GRHL2Q6ISB3 625 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 RNF111Q6ZNA4 994 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 C3orf62Q6ZUJ4 267 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 SEM1Q6ZVN7 128 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 SLC29A4Q7RTT9 530 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
SKA1-205ENST00000494518 ISCA2Q86U28 154 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 CCDC25Q86WR0 208 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 ULK2Q8IYT8 1036 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 NAXEQ8NCW5 288 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 STAG3L4Q8TBR4 150 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 RGMAQ96B86 450 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 MRRFQ96E11 262 aaKnown RBP11.62□□□□□ -0.55
SKA1-205ENST00000494518 ATOH8Q96SQ7 321 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 DOHHQ9BU89 302 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 WWTR1Q9GZV5 400 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 IGSF5Q9NSI5 407 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 ZNF358Q9NW07 568 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 PHF11Q9UIL8 331 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 ANGPTL3Q9Y5C1 460 aa11.62□□□□□ -0.55
SKA1-205ENST00000494518 CHCHD2Q9Y6H1 151 aaPredicted RBP11.62□□□□□ -0.55
SKA1-205ENST00000494518 TMPRSS11DO60235 418 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 KERAO60938 352 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 TRAPPC6AO75865 159 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 FBXO45P0C2W1 286 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 GABRA1P14867 456 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 SSTR4P31391 388 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 SPRP35270 261 aaPredicted RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 FBXW4P57775 412 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 CALCOCO2Q13137 446 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 E2F2Q14209 437 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 EBPQ15125 230 aaKnown RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 PRR22Q8IZ63 422 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 ST13P4Q8IZP2 240 aaPredicted RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 LRRC25Q8N386 305 aaPredicted RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 MYRIPQ8NFW9 859 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 TNIP2Q8NFZ5 429 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 NEIL3Q8TAT5 605 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 DIO2Q92813 273 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 TANKQ92844 425 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 RIT1Q92963 219 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 ART5Q96L15 291 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 ZNF717Q9BY31 904 aaPredicted RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 CLEC4MQ9H2X3 399 aaPredicted RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 NMRAL1Q9HBL8 299 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 ST6GALNAC2Q9UJ37 374 aa11.61□□□□□ -0.55
SKA1-205ENST00000494518 CNOT11Q9UKZ1 510 aaKnown RBP11.61□□□□□ -0.55
SKA1-205ENST00000494518 A0A1W2PR48 441 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 PROM1O43490 865 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 RAD51CO43502 376 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 AIFM1O95831 613 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 CLPSP04118 112 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 LTA4HP09960 611 aaKnown RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 NR2F6P10588 404 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 EPB42P16452 691 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 SERPINB3P29508 390 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 TLX1P31314 330 aaPredicted RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 BUD31P41223 144 aaPredicted RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 NEK2P51955 445 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 AGFG1P52594 562 aaKnown RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 SLC37A1P57057 533 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 DUSP8Q13202 625 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 PFKFB4Q16877 469 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 GRTP1Q5TC63 336 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 CYP20A1Q6UW02 462 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 ZCCHC7Q8N3Z6 543 aaKnown RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 SLC15A4Q8N697 577 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 FBF1Q8TES7 1133 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 RMND5BQ96G75 393 aaPredicted RBP11.6□□□□□ -0.55
SKA1-205ENST00000494518 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 ZNF597Q96LX8 424 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 ERP44Q9BS26 406 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 ACTR8Q9H981 624 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms