RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PRAMEF33A0A0G2JMD5 474 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 LRRC72A6NJI9 287 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 RGS10O43665 173 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 TMPRSS11DO60235 418 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 CLEC3AO75596 197 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 SERPIND1P05546 499 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 EVI2BP34910 448 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 ZNF630Q2M218 657 aaPredicted RBP13.07□□□□□ -0.32
VCP-207ENST00000493886 CLDND1Q9NY35 253 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
VCP-207ENST00000493886 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 M0QX08 132 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 PDPK1O15530 556 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 PCDHGA12O60330 932 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 C9P02748 559 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ARAFP10398 606 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 MAGP20916 626 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 C21orf33P30042 268 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 DGKEP52429 567 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 MVKQ03426 396 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 MAD2L1BPQ15013 274 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 RPE65Q16518 533 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 TSEN54Q7Z6J9 526 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 CREB3L4Q8TEY5 395 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 PROX1Q92786 737 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 GIMAP5Q96F15 307 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 SCARF2Q96GP6 870 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 C5AR2Q9P296 337 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 SCML1Q9UN30 329 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 MYO10Q9HD67 2058 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 A0A0G2JN53 185 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 TRBC2A0A5B9 178 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 PRSS38A1L453 326 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 POM121BA6NF01 834 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 KPNA4O00629 521 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 CD36P16671 472 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 PSMA8Q8TAA3 256 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 MED30Q96HR3 178 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 EPYCQ99645 322 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 COQ7Q99807 217 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 APOL4Q9BPW4 351 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 MIR1-1HGQ9H1L0 117 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ACOT13Q9NPJ3 140 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 JRKO75564 520 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 ALAS2P22557 587 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 RRM2P31350 389 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 CLDN2P57739 230 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 OXA1LQ15070 435 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 IFI44LQ53G44 452 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 SOWAHCQ53LP3 525 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 CEP78Q5JTW2 689 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 OR4C11Q6IEV9 310 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 AMER3Q8N944 861 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 TTLQ8NG68 377 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 OR2M4Q96R27 311 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 DUSP21Q9H596 190 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
VCP-207ENST00000493886 NDUFAF4Q9P032 175 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 PCDHGB3Q9Y5G1 929 aa13.06□□□□□ -0.32
VCP-207ENST00000493886 LRIT2A6NDA9 550 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 SLC22A1O15245 554 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 PPM1DO15297 605 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 PRICKLE3O43900 615 aaPredicted RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 BCL6P41182 706 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 GSTM5P46439 218 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 OR1E2P47887 323 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 SLC13A2Q13183 592 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 DGUOKQ16854 277 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 TEFMQ96QE5 360 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 ZNF300Q96RE9 604 aaPredicted RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 AICDAQ9GZX7 198 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 SLC6A20Q9NP91 592 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 WBP4O75554 376 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 BTF3P20290 206 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 GRK3P35626 688 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 SSR2P43308 183 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 IDH2P48735 452 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 PCBP3P57721 371 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 PCBP4P57723 403 aaKnown RBP13.05□□□□□ -0.32
VCP-207ENST00000493886 KIAA1614Q5VZ46 1190 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 SAXO2Q658L1 398 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 FAHD1Q6P587 224 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms