RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SH3BGRLO75368 114 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SERPINB7O75635 380 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 BMP10O95393 424 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 NTRK1P04629 796 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SERPIND1P05546 499 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 IFI6P09912 130 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 HIST1H1TP22492 207 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 MPIP34949 423 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SOAT1P35610 550 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 DCTP40126 519 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 MAPK10P53779 464 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 TPD52P55327 224 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 DSTNP60981 165 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SELENOWP63302 87 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 CSNK2BP67870 215 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 CYP4F2P78329 520 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ADARB1P78563 741 aaKnown RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PRR5P85299 388 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PPP2R2BQ00005 443 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 TP53BP2Q13625 1128 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SMAD2Q15796 467 aaKnown RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ALG11Q2TAA5 492 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 RBM48Q5RL73 367 aaKnown RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 OTUD3Q5T2D3 398 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SAXO2Q658L1 398 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ADNP2Q6IQ32 1131 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 DUS1LQ6P1R4 473 aaKnown RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ABHD17CQ6PCB6 329 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 IYDQ6PHW0 289 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 USP51Q70EK9 711 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 RD3Q7Z3Z2 195 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 THAP5Q7Z6K1 395 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ASPGQ86U10 573 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PAQR7Q86WK9 346 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 C8orf59Q8N0T1 100 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 C2orf73Q8N5S3 287 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 CADM4Q8NFZ8 388 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 NR4A3Q92570 626 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 FKBP10Q96AY3 582 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PDXPQ96GD0 296 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 BBS4Q96RK4 519 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 IER2Q9BTL4 223 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF717Q9BY31 904 aaPredicted RBP9.49□□□□□ -0.89
PRPF3-206ENST00000493553 ABCG4Q9H172 646 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SLC6A17Q9H1V8 727 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 XKR8Q9H6D3 395 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 NTN4Q9HB63 628 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 C3orf14Q9HBI5 128 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 FZD3Q9NPG1 666 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 SLC35C2Q9NQQ7 365 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 USP22Q9UPT9 525 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 V9GYQ6 96 aa9.49□□□□□ -0.89
PRPF3-206ENST00000493553 CROCCQ5TZA2 2017 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 A0A1W2PPC4 97 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 OR2A25A4D2G3 310 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 SLC16A6O15403 523 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ERI3O43414 337 aaKnown RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 KIF1CO43896 1103 aaKnown RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 MRPS14O60783 128 aaKnown RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 NDUFS2O75306 463 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 DNAJB5O75953 348 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 C9P02748 559 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 SEMG1P04279 462 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ITGAMP11215 1152 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 CTSEP14091 401 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 JUNBP17275 347 aaPredicted RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 CSNK2A2P19784 350 aaPredicted RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ATP5A1P25705 553 aaKnown RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 RYKP34925 604 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 BCL6P41182 706 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 BUD31P41223 144 aaPredicted RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ALDH9A1P49189 494 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 KHKP50053 298 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 CLDN2P57739 230 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 MYBPC1Q00872 1141 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 GAB1Q13480 694 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 APOFQ13790 326 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 SPIDRQ14159 915 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 NKPD1Q17RQ9 610 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ZNF385BQ569K4 471 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 NDUFAF5Q5TEU4 345 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ANKRD26P1Q6NSI1 321 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ARMC6Q6NXE6 501 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 SPESP1Q6UW49 350 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ABHD13Q7L211 337 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 CYP4Z1Q86W10 505 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ADGRF3Q8IZF5 1079 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 NAGSQ8N159 534 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 LINC00471Q8N535 108 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 ACOT4Q8N9L9 421 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 C7orf57Q8NEG2 295 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 OR4E2Q8NGC2 313 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 RERGQ96A58 199 aaPredicted RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 MS4A6EQ96DS6 147 aa9.48□□□□□ -0.89
PRPF3-206ENST00000493553 TOE1Q96GM8 510 aaKnown RBP9.48□□□□□ -0.89
PRPF3-206ENST00000493553 MAGED4Q96JG8 741 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms