RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ZDHHC6Q9H6R6 413 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ABCC13Q9NSE7 274 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ETNK2Q9NVF9 386 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ATAD3AQ9NVI7 634 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 FBXL12Q9NXK8 326 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 WSB2Q9NYS7 404 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CLIC5Q9NZA1 410 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CHMP5Q9NZZ3 219 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 UBA2Q9UBT2 640 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 GPR52Q9Y2T5 361 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 HBS1LQ9Y450 684 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 HYOU1Q9Y4L1 999 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PCYT1BQ9Y5K3 369 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 OR51B4Q9Y5P0 310 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 AHCTF1Q8WYP5 2266 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 EIF4E1BA6NMX2 242 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 TMEM110-MUSTN1A8MSY1 372 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MAGEB17A8MXT2 336 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 E9PAM4 449 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 F5H5T6 163 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SLCO1B7G3V0H7 640 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SLC22A2O15244 555 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 JRKO75564 520 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ZMPSTE24O75844 475 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RHOBTB1O94844 696 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 APOEP02649 317 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 UGT2B4P06133 528 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 LIPFP07098 398 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RHOCP08134 193 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 GIMD1P0DJR0 217 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 LIFP15018 202 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 UCHL3P15374 230 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 IL7RP16871 459 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 EIF2DP41214 584 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 TNFRSF4P43489 277 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RPL34P49207 117 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 HARS2P49590 506 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MAXP61244 160 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 VAMP2P63027 116 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 GCNT1Q02742 428 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 GALNT2Q10471 571 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 C1orf61Q13536 156 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 EIF4EBP2Q13542 120 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PDE1CQ14123 709 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 DLG2Q15700 870 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 BAK1Q16611 211 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 UGP2Q16851 508 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PRICKLE4Q2TBC4 344 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC14Q49A88 953 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MPPE1Q53F39 396 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ADAMTSL4-AS1Q5T5F5 129 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ARMC12Q5T9G4 340 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF776Q68DI1 518 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RWDD4Q6NW29 188 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SCYL2Q6P3W7 929 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 C22orf39Q6P5X5 142 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 WDR59Q6PJI9 974 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 GCNT7Q6ZNI0 430 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 CYP4V2Q6ZWL3 525 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 VPS36Q86VN1 386 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 FAM71AQ8IYT1 594 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RYBPQ8N488 228 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF614Q8N883 585 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 OR1J2Q8NGS2 313 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 OR2T3Q8NH03 318 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 GRHL3Q8TE85 626 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PATE1Q8WXA2 126 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PRCCQ92733 491 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MSANTD3Q96H12 275 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SEMA3CQ99985 751 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RHNO1Q9BSD3 238 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 FUCA2Q9BTY2 467 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 CALN1Q9BXU9 219 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RSPH9Q9H1X1 276 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PDCL3Q9H2J4 239 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SYNCQ9H7C4 482 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 SYNDIG1Q9H7V2 258 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 POPDC2Q9HBU9 364 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MRPL40Q9NQ50 206 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC177Q9NQR7 707 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 MBNL1Q9NR56 388 aaKnown RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PTTG2Q9NZH5 202 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 KLHL8Q9P2G9 620 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-218ENST00000493430 WDR35Q9P2L0 1181 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 LHX3Q9UBR4 397 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 PCSK1NQ9UHG2 260 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 VPS28Q9UK41 221 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ANGPTL2Q9UKU9 493 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 ATP6V1DQ9Y5K8 247 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 RPS6KL1Q9Y6S9 549 aa2.78□□□□□ -1.96
PTCD3-218ENST00000493430 DSPP15924 2871 aaKnown RBP2.78□□□□□ -1.97
PTCD3-218ENST00000493430 NBEAQ8NFP9 2946 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CFAP47Q6ZTR5 3102 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 A0A1B0GVC2 190 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 A0A1W2PR77 199 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 BICDL2A1A5D9 508 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 C1orf226A1L170 272 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PRR32B1ATL7 298 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 EIF3CLB5ME19 914 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms