RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
CCM2-217ENST00000492883 KMT2BQ9UMN6 2715 aaPredicted RBP13.02□□□□□ -0.33
CCM2-217ENST00000492883 KLF11O14901 512 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SNNO75324 88 aaPredicted RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 C1QL1O75973 258 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 DDAH2O95865 285 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 F10P00742 488 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 KITP10721 976 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 TACR1P25103 407 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 CD97P48960 835 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 ERVK-8P63133 956 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SPRED3Q2MJR0 410 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 HSP90B2PQ58FF3 399 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 C6orf136Q5SQH8 315 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 HSDL2Q6YN16 418 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 TICAM1Q8IUC6 712 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 GALNT12Q8IXK2 581 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SAMD14Q8IZD0 417 aaPredicted RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 ZNF321PQ8N8H1 164 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 HAS2Q92819 552 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 EGLN2Q96KS0 407 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 TSSK3Q96PN8 268 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 NUF2Q9BZD4 464 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SLAMF7Q9NQ25 335 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCM2-217ENST00000492883 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 BAIAP2L1Q9UHR4 511 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
CCM2-217ENST00000492883 EIF3LQ9Y262 564 aaKnown RBP13.01□□□□□ -0.33
CCM2-217ENST00000492883 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
CCM2-217ENST00000492883 HRKO00198 91 aa13□□□□□ -0.33
CCM2-217ENST00000492883 FCHO1O14526 889 aa13□□□□□ -0.33
CCM2-217ENST00000492883 AKAP10O43572 662 aa13□□□□□ -0.33
CCM2-217ENST00000492883 MAN1A2O60476 641 aa13□□□□□ -0.33
CCM2-217ENST00000492883 LRATO95237 230 aa13□□□□□ -0.33
CCM2-217ENST00000492883 WDPCPO95876 746 aa13□□□□□ -0.33
CCM2-217ENST00000492883 JUNP05412 331 aaKnown RBP13□□□□□ -0.33
CCM2-217ENST00000492883 BCKDHAP12694 445 aa13□□□□□ -0.33
CCM2-217ENST00000492883 SDC1P18827 310 aa13□□□□□ -0.33
CCM2-217ENST00000492883 HK2P52789 917 aa13□□□□□ -0.33
CCM2-217ENST00000492883 MLF1P58340 268 aa13□□□□□ -0.33
CCM2-217ENST00000492883 OC90Q02509 493 aaPredicted RBP13□□□□□ -0.33
CCM2-217ENST00000492883 IL23RQ5VWK5 629 aa13□□□□□ -0.33
CCM2-217ENST00000492883 IKBIPQ70UQ0 350 aa13□□□□□ -0.33
CCM2-217ENST00000492883 CCDC116Q8IYX3 515 aa13□□□□□ -0.33
CCM2-217ENST00000492883 LGI4Q8N135 537 aa13□□□□□ -0.33
CCM2-217ENST00000492883 LRRC25Q8N386 305 aaPredicted RBP13□□□□□ -0.33
CCM2-217ENST00000492883 CATSPER1Q8NEC5 780 aa13□□□□□ -0.33
CCM2-217ENST00000492883 OR5L2Q8NGL0 311 aa13□□□□□ -0.33
CCM2-217ENST00000492883 CLHC1Q8NHS4 586 aa13□□□□□ -0.33
CCM2-217ENST00000492883 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
CCM2-217ENST00000492883 CNRIP1Q96F85 164 aaPredicted RBP13□□□□□ -0.33
CCM2-217ENST00000492883 FBXL20Q96IG2 436 aa13□□□□□ -0.33
CCM2-217ENST00000492883 FCRL1Q96LA6 429 aa13□□□□□ -0.33
CCM2-217ENST00000492883 ZNF681Q96N22 645 aa13□□□□□ -0.33
CCM2-217ENST00000492883 BBS4Q96RK4 519 aa13□□□□□ -0.33
CCM2-217ENST00000492883 NPAS2Q99743 824 aa13□□□□□ -0.33
CCM2-217ENST00000492883 C1orf50Q9BV19 199 aa13□□□□□ -0.33
CCM2-217ENST00000492883 BRINP2Q9C0B6 783 aa13□□□□□ -0.33
CCM2-217ENST00000492883 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13□□□□□ -0.33
CCM2-217ENST00000492883 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
CCM2-217ENST00000492883 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
CCM2-217ENST00000492883 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
CCM2-217ENST00000492883 CFAP47Q6ZTR5 3102 aa13□□□□□ -0.33
CCM2-217ENST00000492883 OR5H15A6NDH6 313 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 GABRR3A8MPY1 467 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 SUV39H1O43463 412 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 PRKNO60260 465 aaPredicted RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 VPS4BO75351 444 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ATP1B1P05026 303 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 PRPS2P11908 318 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 MPIP34949 423 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 CASRP41180 1078 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ASMTP46597 345 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ST13P50502 369 aaKnown RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 RNF4P78317 190 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 OCRLQ01968 901 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 EMX2Q04743 252 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 MAD2L1Q13257 205 aaPredicted RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 TLR1Q15399 786 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 PLEKHN1Q494U1 663 aaPredicted RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 SLC6A19Q695T7 634 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 RNF111Q6ZNA4 994 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 Q6ZS92 163 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 PRICKLE2Q7Z3G6 844 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 WDR75Q8IWA0 830 aaKnown RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 LIX1Q8N485 282 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ADCY4Q8NFM4 1077 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 OR8K3Q8NH51 312 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 SUN3Q8TAQ9 357 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms