RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 VN1R1Q9GZP7 353 aa20.39■□□□□ 0.86
VCPKMT-204ENST00000491402 WDR54Q9H977 334 aa20.39■□□□□ 0.86
VCPKMT-204ENST00000491402 IL1RL2Q9HB29 575 aa20.39■□□□□ 0.86
VCPKMT-204ENST00000491402 THSD1Q9NS62 852 aa20.39■□□□□ 0.86
VCPKMT-204ENST00000491402 PCDHGB4Q9UN71 923 aa20.39■□□□□ 0.86
VCPKMT-204ENST00000491402 MYOCOSA0A1B0GUC4 107 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 HNRNPCL1O60812 293 aaKnown RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 CPSF4O95639 269 aaKnown RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 ABCB1P08183 1280 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 TRMT5Q32P41 509 aaKnown RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 DLEU7Q6UYE1 221 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 DHDDSQ86SQ9 333 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 RBM15BQ8NDT2 890 aaKnown RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 OR5P2Q8WZ92 322 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 ROPN1LQ96C74 230 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC7A6OSQ96CW6 309 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 SPSB2Q99619 263 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 SOX17Q9H6I2 414 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 NEUROD4Q9HD90 331 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 NECTIN3Q9NQS3 549 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC6A13Q9NSD5 602 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 TAS2R9Q9NYW1 312 aa20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 GPN3Q9UHW5 284 aaPredicted RBP20.39■□□□□ 0.85
VCPKMT-204ENST00000491402 A0A096LPI6 279 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 IGKV3D-11A0A0A0MRZ8 115 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 FXYD1O00168 92 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 RECKO95980 971 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 KRT16P08779 473 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 PTPN6P29350 595 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 MAP7Q14244 749 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 NCF4Q15080 339 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 LRIF1Q5T3J3 769 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 RINLQ6ZS11 566 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 ESX1Q8N693 406 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 GOT1L1Q8NHS2 421 aaPredicted RBP20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 LRRC58Q96CX6 371 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC39A3Q9BRY0 314 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 ALOXE3Q9BYJ1 711 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 PAIP1Q9H074 479 aaKnown RBP20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 GID8Q9NWU2 228 aa20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 NXT1Q9UKK6 140 aaKnown RBP20.38■□□□□ 0.85
VCPKMT-204ENST00000491402 STMND1H3BQB6 276 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 ERN1O75460 977 aaKnown RBP20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 NPPAP01160 153 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 ATP1B1P05026 303 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 GSNP06396 782 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 PTGER1P34995 402 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 CPOXP36551 454 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 TRPC1P48995 793 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC25A3Q00325 362 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 LACTB2Q53H82 288 aaPredicted RBP20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 CPZQ66K79 652 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 HACD2Q6Y1H2 254 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 TMEM151BQ8IW70 566 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 NLGN4XQ8N0W4 816 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 NLGN4YQ8NFZ3 816 aaPredicted RBP20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 OR9A2Q8NGT5 310 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 DNAJB8Q8NHS0 232 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 GATA6Q92908 595 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 TSLPQ969D9 159 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 C1orf21Q9H246 121 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 TAS2R1Q9NYW7 299 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 VAPAQ9P0L0 249 aa20.37■□□□□ 0.85
VCPKMT-204ENST00000491402 IDSB3KWA1 339 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 ANP32DO95626 131 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC35E2P0CK97 266 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 HOXB9P17482 250 aaPredicted RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 CD82P27701 267 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 RASSF2P50749 326 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 SERTAD2Q14140 314 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 LTB4RQ15722 352 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 GTDC1Q4AE62 458 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 ST13P4Q8IZP2 240 aaPredicted RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 PSMA8Q8TAA3 256 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 ZNF578Q96N58 590 aaPredicted RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 TRIM4Q9C037 500 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 SLC25A37Q9NYZ2 338 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 PCDHB14Q9Y5E9 798 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 IGF2RP11717 2491 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 CDK9P50750 372 aaKnown RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 NCALDP61601 193 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 GAB1Q13480 694 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 CAPRIN1Q14444 709 aaKnown RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 NSDHLQ15738 373 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 TBC1D25Q3MII6 688 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 ZNF621Q6ZSS3 439 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 PLPP5Q8NEB5 264 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 ADCY4Q8NFM4 1077 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 CT55Q8WUE5 264 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 CXorf36Q9H7Y0 433 aa20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 SIRT3Q9NTG7 399 aaPredicted RBP20.36■□□□□ 0.85
VCPKMT-204ENST00000491402 TRBV5-3A0A0A0MS03 114 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 TCRBV16S1A1N1A0A5B0 115 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 OR10H2O60403 315 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 KLF7O75840 302 aaPredicted RBP20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 HEXBP07686 556 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 GPC1P35052 558 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 BIKQ13323 160 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 C8orf82Q6P1X6 216 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms