RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 OR1G1P47890 313 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 MFAP4P55083 255 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 NDUFV3P56181 108 aaKnown RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 KLC1Q07866 573 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TRIM29Q14134 588 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TFDP1Q14186 410 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 IRF3Q14653 427 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 DHRS7BQ6IAN0 325 aaPredicted RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 FUT10Q6P4F1 479 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 CDR2LQ86X02 465 aaPredicted RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 CEP57Q86XR8 500 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 ADGRF2Q8IZF7 708 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 MAML2Q8IZL2 1156 aaPredicted RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 CCDC185Q8N715 623 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TMEM105Q8N8V8 129 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 THAP8Q8NA92 274 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TDRD5Q8NAT2 981 aaKnown RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 SAT2Q96F10 170 aaPredicted RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 PHYHIPLQ96FC7 376 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 MPP4Q96JB8 637 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 LLPHQ9BRT6 129 aaKnown RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 CCDC28BQ9BUN5 200 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 NT5C3AQ9H0P0 336 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 POLR3FQ9H1D9 316 aaPredicted RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 CXCL16Q9H2A7 254 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 NXF3Q9H4D5 531 aaKnown RBP2.78□□□□□ -1.96
PHC3-213ENST00000491258 POLD4Q9HCU8 107 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TUFT1Q9NNX1 390 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 NLGN3Q9NZ94 848 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 EPS15L1Q9UBC2 864 aa2.78□□□□□ -1.96
PHC3-213ENST00000491258 TRBV5-5A0A0J9YX44 114 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ARHGEF35A5YM69 484 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 LRRIQ4A6NIV6 560 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ANHXE9PGG2 379 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ADAM12O43184 909 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 TADA2AO75478 443 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ERAL1O75616 437 aaKnown RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 ATP1B1P05026 303 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 OR52Z1P0C646 297 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 MUTP22033 750 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 U2AF2P26368 475 aaKnown RBP eCLIP2.77□□□□□ -1.97
PHC3-213ENST00000491258 NBL1P41271 181 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 HNRNPA3P51991 378 aaKnown RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 DCAF7P61962 342 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 PPIAP62937 165 aaKnown RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 ORC2Q13416 577 aaPredicted RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 PRPF4BQ13523 1007 aaKnown RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 PDIA5Q14554 519 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 IL17AQ16552 155 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 MAPK6Q16659 721 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 XKR4Q5GH76 650 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 FAM180BQ6P0A1 224 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 TEX38Q6PEX7 206 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 DCLRE1AQ6PJP8 1040 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 PRSS55Q6UWB4 352 aaPredicted RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 CD300LGQ6UXG3 332 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ALKAL1Q6UXT8 129 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 FCRLAQ7L513 359 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 MAATS1Q7Z4T9 603 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 DAW1Q8N136 415 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 EXD1Q8NHP7 514 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ERMNQ8TAM6 284 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 SYN2Q92777 582 aaPredicted RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 C8orf76Q96K31 380 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ZNF285Q96NJ3 590 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 APOL6Q9BWW8 343 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 C2orf40Q9H1Z8 148 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.77□□□□□ -1.97
PHC3-213ENST00000491258 PRMT7Q9NVM4 692 aaPredicted RBP2.77□□□□□ -1.97
PHC3-213ENST00000491258 DPP3Q9NY33 737 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 ADAM28Q9UKQ2 775 aa2.77□□□□□ -1.97
PHC3-213ENST00000491258 COL4A6Q14031 1691 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 CLUHO75153 1309 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 SF3B1O75533 1304 aaKnown RBP eCLIP2.76□□□□□ -1.97
PHC3-213ENST00000491258 SMIM28A0A1B0GU29 152 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 FEZF1A0PJY2 475 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 CASTOR2A6NHX0 329 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 E9PMD0 336 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 K7ERI5 159 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 TLX2O43763 284 aaPredicted RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 PTP4A3O75365 173 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 B3GAT3O94766 335 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 KCNE1P15382 129 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 HOXA9P31269 272 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 OR1D2P34982 312 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 CCT6AP40227 531 aaKnown RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 PRPHP41219 470 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 NAMPTP43490 491 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 ARF3P61204 181 aaPredicted RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 NTHL1P78549 312 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 HMGN5P82970 282 aaKnown RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 ARF1P84077 181 aaKnown RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 HTR4Q13639 388 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 PSMD5Q16401 504 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 UPP1Q16831 310 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 DCAF4L1Q3SXM0 396 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 RNASEH2BQ5TBB1 312 aaKnown RBP2.76□□□□□ -1.97
PHC3-213ENST00000491258 ATF7IP2Q5U623 682 aa2.76□□□□□ -1.97
PHC3-213ENST00000491258 C1orf186Q6ZWK4 172 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms