RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 MPZL2O60487 215 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MMP20O60882 483 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PFDN1O60925 122 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NDUFS2O75306 463 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MOSPD3O75425 235 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SEMA3DO95025 777 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 AGFG2O95081 481 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 LRATO95237 230 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CLIC3O95833 236 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ANGPTL1O95841 491 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GHRHP01286 108 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MT-ND1P03886 318 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SEMG1P04279 462 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GPR89BP0CG08 455 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 LAMP1P11279 417 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NPPBP16860 134 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 UQCRC2P22695 453 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TACR1P25103 407 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ELK4P28324 431 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TEAD1P28347 426 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PCSK6P29122 969 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 IMPA1P29218 277 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GRK3P35626 688 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CCR2P41597 374 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GPR1P46091 355 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ST13P50502 369 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ITGA1P56199 1179 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 C21orf59P57076 290 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SMIM11AP58511 58 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TRA2BP62995 288 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SELENOWP63302 87 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TUBA1BP68363 451 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 IL5RAQ01344 420 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF763Q0D2J5 394 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 C2orf80Q0P641 193 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ELAVL3Q14576 367 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF846Q147U1 533 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PDGFRLQ15198 375 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 RGNQ15493 299 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NPTX1Q15818 432 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NEDD8Q15843 81 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NKG7Q16617 165 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MEP1AQ16819 746 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 DGUOKQ16854 277 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ZXDCQ2QGD7 858 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 HNRNPA1L2Q32P51 320 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 INAVAQ3KP66 663 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GTDC1Q4AE62 458 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 IFI44LQ53G44 452 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GCNT6Q5T4J0 391 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SYT6Q5T7P8 510 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GTF2IRD2BQ6EKJ0 949 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 FAHD1Q6P587 224 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CRTC3Q6UUV7 619 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 NXPE4Q6UWF7 544 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ISLR2Q6UXK2 745 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SERPINA13PQ6UXR4 307 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ADAMTSL4Q6UY14 1074 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 DNAJC14Q6Y2X3 702 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 DBX2Q6ZNG2 339 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 RFLNAQ6ZTI6 216 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GTF2IRD2Q86UP8 949 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ANKRD46Q86W74 232 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ARMC8Q8IUR7 673 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 VRK3Q8IV63 474 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SYTL1Q8IYJ3 562 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CFAP206Q8IYR0 622 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 CACTIN-AS1Q8N1I8 211 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 METTL4Q8N3J2 472 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 OXR1Q8N573 874 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TTC29Q8NA56 475 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ATG16L2Q8NAA4 619 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 OR7A2PQ8NGA2 310 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 OR52N2Q8NGI0 321 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 OR4A15Q8NGL6 344 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 OR2L2Q8NH16 312 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 B4GALNT2Q8NHY0 566 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 HUS1BQ8NHY5 278 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 GIPC3Q8TF64 312 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 RASSF5Q8WWW0 418 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 SLC5A11Q8WWX8 675 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 EZH1Q92800 747 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MYDGFQ969H8 173 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MUL1Q969V5 352 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PYCR2Q96C36 320 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PPCDCQ96CD2 204 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 COG8Q96MW5 612 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MTERF1Q99551 399 aaKnown RBP4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PITX2Q99697 317 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 HDAC8Q9BY41 377 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 AMBRA1Q9C0C7 1298 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 RHBGQ9H310 441 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 TMEM38AQ9H6F2 299 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 ZNF556Q9HAH1 456 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 PELI2Q9HAT8 420 aa4.81□□□□□ -1.64
PTPRK-213ENST00000490332 MYNNQ9NPC7 610 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms